DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr23a

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_787965.1 Gene:Gr23a / 33453 FlyBaseID:FBgn0041248 Length:374 Species:Drosophila melanogaster


Alignment Length:389 Identity:69/389 - (17%)
Similarity:150/389 - (38%) Gaps:95/389 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 VFAYSLTIYNNCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAF-VPNHRLERCLQ----- 149
            ::|.::....:|.      .|..:|:|    |.||....|...:|..| :...:|:..:.     
  Fly    57 IYAQTIDCTLDCS------LRHILTFF----QTVSHAFIVVTSFLDGFRIKQDQLDEPIAFEDSD 111

  Fly   150 ---KFHTMDVQLQTVGVK-IMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFT 210
               .|..:.:.:.|:||: ::.|....:::.:.|                 |..:..|:.     
  Fly   112 PWLAFTVLAMLVPTLGVEYLVCSNAPEYAFRIRI-----------------YHLKTLPSF----- 154

  Fly   211 FLIQHTVIAIAIALFSCFTYLVEMRLVMVNK---------VLKNLAHQWDTRSLKAVNQKQRSLQ 266
                   :|:.:.:.|   :::|:..|.:..         :.:.|:.:|..|..|.....|::.:
  Fly   155 -------LALQVQIIS---FILEVMKVNIRVRQTKLQLLILARELSCRWPQRKQKPQFSDQQAHR 209

  Fly   267 CLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLET 331
            ..|....|.              ::|:|.    ...|.||...|||||.:.|.|.|.::|::...
  Fly   210 VKDLKRRYN--------------DLHYLF----VRINGYFGGSLLTIIIVHFAIFVSNSYWLFVD 256

  Fly   332 LLGKSKRESKFKTVEFVTFFSCQMILYLIAIISIVEGS-----NRAIKKSEKTGGIVHSLLNKTK 391
            :..:..|           .::..:.|..|..:::...:     .::.....:.|.::..|:....
  Fly   257 IRTRPWR-----------IYAILLNLGFIFNVALQMAAACWHCQQSYNLGRQIGCLISKLVKPQG 310

  Fly   392 SAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQFTSNSPNNGYGNG 455
            |....:.:.:||:|.:|.:...||...|:::..|..::..|:.|||:||:||.....::..|:|
  Fly   311 SKLYNDLVSEFSLQTLHQRFVVTAKDFFSLNLHLLSSMFAAVVTYLVILIQFMFAERSSTRGSG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 65/375 (17%)
Gr23aNP_787965.1 7tm_7 <141..362 CDD:285581 48/281 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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