DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr59c

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_726292.1 Gene:Gr59c / 192481 FlyBaseID:FBgn0041235 Length:397 Species:Drosophila melanogaster


Alignment Length:431 Identity:81/431 - (18%)
Similarity:175/431 - (40%) Gaps:69/431 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LYECLRPVFHVTYIHGL----TSFYISCDTKTGKKAI---KKTIFGYINGIMHIAMFVFAYSLTI 98
            :.:.::.:..:.|.:||    ::|.:  |..|| :||   :.||:..::....|.:.:.   ..:
  Fly     1 MVDLVKTILLIAYWYGLAVGVSNFEV--DWLTG-EAIATRRTTIYAAVHNASLITLLIL---FNL 59

  Fly    99 YNNCESVASYFFRSRI--TYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTM--DVQLQ 159
            .||  |:.|.|..:|.  .||..||..|. ...|.:..:|.:....|..|...:...:  |....
  Fly    60 GNN--SLKSEFISARYLHEYFFMLMTAVR-ISAVLLSLITRWYQRSRFIRIWNQILALVRDRPQV 121

  Fly   160 TVGVKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEV-APTMALHFTFLIQHTVIAIAIA 223
            ..|.....|.:|:|.:.||             :.|:...|:| |....:....:::.:::|....
  Fly   122 VRGRWYRRSIILKFVFCVL-------------SDSLHTISDVSAQRKRITADLIVKLSLLATLTT 173

  Fly   224 LFS---CFTYLVEMRLVMVNKVLKNLAHQWDTRSLKAVNQKQRSLQCLDSF-----SMYTIVTKD 280
            :|:   |..||..::::.:.|:|..     |.|.|      .|..:|:.|.     .:|:|....
  Fly   174 IFNMIVCQYYLAMVQVIGLYKILLQ-----DLRCL------VRQAECICSIRNRRGGVYSIQCCS 227

  Fly   281 PAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTV 345
            .|:.:....|.|:.:.:.....:..|..|.|::..:.|...:...|:.:.::|        :.:.
  Fly   228 LADQLDLIAERHYFLKDRLDEMSDLFQIQSLSMSLVYFFSTMGSIYFSVCSIL--------YSST 284

  Fly   346 EF-VTFFSCQMIL------YLIAIISIVEGSNRAIKKSEKTGGIV-HSLLNKTKSAEVKEKLQQF 402
            .| .|::...:|:      |:...:|:..|.:...::.|....:. .:|..:.....::...:.|
  Fly   285 GFGSTYWGLLLIVLSTASFYMDNWLSVNIGFHIRDQQDELFRVLADRTLFYRELDNRLEAAFENF 349

  Fly   403 SMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQF 443
            .:||...:..|...|||.::|.....:..::.|:.::|:|:
  Fly   350 QLQLASNRHEFYVMGLFKMERGRLIAMLSSVITHTMVLVQW 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 80/425 (19%)
Gr59cNP_726292.1 7tm_7 9..394 CDD:285581 81/423 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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