DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and egl-47

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:487 Identity:100/487 - (20%)
Similarity:181/487 - (37%) Gaps:125/487 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PGLCQPLRRRFRRFVTAKQLYEC-----------LRPVFHVTYIHGLTSFYISCDTKTGKKAIKK 75
            ||..:..::|      .:.|:||           ||.:..:..:  |..|..:.|.|:.:|...:
 Worm    82 PGANKKDKKR------RESLFECSWRGVHCVSNSLRSILFLFRL--LAIFPATTDRKSRRKRNHR 138

  Fly    76 TIFGYINGIMHIAMFVFAYSLTIYNNCESVASYFFRSRITYFGDLMQIVSG---FIGVTVIYLTA 137
            :|...|..:.:|.:.|...|..|..|.:.:..|..:..:.:.|.:..:::.   .|.|.||.|:|
 Worm   139 SIIKLILYVNYIVLAVLLNSFLIKMNFKVLMLYKHKFGLMHTGTVASMITATKPVINVFVIVLSA 203

  Fly   138 F-VPNHRLERCLQKFHTMDVQLQTV-GVKIMYSKVLR-----FSYMVLISMF------LVNVLFT 189
            . ..:|  :|.|:....:||..::. ||    |..||     |.:.:||..|      :|..:.|
 Worm   204 IKFKSH--QRLLKTIDMVDVCFRSAFGV----SPPLRIYKFVFFFTLLIIFFSALILKVVEFVGT 262

  Fly   190 GGTFS-------------VLYSSEVAPTMALH-FTFLIQHTVIAIAIALFSCFTYLVEMRLVMVN 240
            |..|.             ||....:.|.:..| :..|::          |.|.|.:..|      
 Worm   263 GEIFGEHILTDCSFILVPVLSLWNIIPLLYYHLYNILVR----------FYCRTLIKSM------ 311

  Fly   241 KVLKNLAHQWDTRSLKAVNQKQRSLQCLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKY 305
                |..|            |:|.......:..:|.:|.     :||::             ...
 Worm   312 ----NREH------------KKRHFSLKFYYEQFTRITN-----VQEAV-------------GDV 342

  Fly   306 FTYQLLTIISIAFLIIVFDAYYVLE---TLL---------GKSKRESKFKTVEF-VTFFSCQMIL 357
            |...||..::.:.|::....|::.|   |||         ....||....||.. :.:.:.|:::
 Worm   343 FNPLLLFSLAWSLLVLCLTLYFLSEPTSTLLVPITPEQVTNPKIREKLNITVHVKICWAAYQVVM 407

  Fly   358 YLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINF----TAAGL 418
            .::.||.|   .:..:..:|.|..||:::|.....|.......|.|..:..:...|    |....
 Worm   408 AILHIIII---CSTGMMTNETTRQIVNAVLRIVPDANADLDRFQISCFVHKMTTQFMWGMTVWRA 469

  Fly   419 FNIDRTLYFTISGALTTYLIILLQFTSNSPNN 450
            |.::||.:||:...:.||.::|.:|..:...|
 Worm   470 FPLERTTFFTLISVIVTYSLLLFRFKDDMVQN 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 92/444 (21%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:303125 92/445 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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