DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr36c

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_724040.1 Gene:Gr36c / 117486 FlyBaseID:FBgn0045485 Length:390 Species:Drosophila melanogaster


Alignment Length:430 Identity:78/430 - (18%)
Similarity:164/430 - (38%) Gaps:83/430 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LRPVFHVTYIHGLTSFYISCDTKTGKKAIKK--TIFGYINGIMHIAMFVFAYSLTIYN---NCES 104
            |..|::.....||::|  ..|..||:...||  |::.       ||:....::|.||:   |...
  Fly     8 LGAVYYYGLFIGLSNF--EFDWNTGRVFTKKWSTLYA-------IALDSCIFALYIYHWTGNTNI 63

  Fly   105 VASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIMYSK 169
            |.:.|.|:.:.: ..::.|::|...||.::..       :.|..|:...||:..:.|.:.:...:
  Fly    64 VNAIFGRANMLH-EYVVAILTGLRIVTGLFTL-------ILRWYQRCKMMDLASKVVRMYVARPQ 120

  Fly   170 VLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAI---------AIALF 225
            |.|.|...:::.|:...:..|...:::.|:..:.....:....:|:.:..|         .|.||
  Fly   121 VRRMSRWGILTKFIFGSITDGLQMAMVLSAMGSVDSQFYLGLGLQYWMFVILNMAMMQQHMIMLF 185

  Fly   226 SCFTYLVEMRLVMVNKVLKNLAHQWDTRSLKAVNQKQRSLQC---LDSFSMYTIVTKDPAEIIQE 287
                  |..:..::|..|:.:..:.....|...:|.....:|   .|.......:......|:.:
  Fly   186 ------VRTQFQLINTELRQVIDEAKDLLLSPRHQGVFMTKCCSLADQIENIARIQSQLQTIMNQ 244

  Fly   288 SMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTVEFVTFFS 352
            ..|:..:  :.|.|...|:    |:.:...:|     ||.:|:.  |.........||  :..:|
  Fly   245 MEEVFGI--QGAMTYGGYY----LSSVGTCYL-----AYSILKH--GYENLSMTLSTV--ILAYS 294

  Fly   353 CQMILYLIAIISIVEGSNRAIKKSEKTGGIVH---------SLLNKTK-----SAEVKEKLQQFS 403
            .....||..::::              ..::|         .:|.|..     ...::|..:..:
  Fly   295 WCFFYYLDGMLNL--------------SVMLHVQDDYWEMLQILGKRTIFVGLDVRLEEAFENLN 345

  Fly   404 MQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQF 443
            :||:...:..|...|:::.|:....:.|.|.|:.|.|:|:
  Fly   346 LQLIRNPLKITVVKLYDVTRSNTMAMFGNLITHSIFLIQY 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 77/428 (18%)
Gr36cNP_724040.1 7tm_7 8..389 CDD:285581 78/430 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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