DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr59b

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_523818.2 Gene:Gr59b / 117484 FlyBaseID:FBgn0045482 Length:366 Species:Drosophila melanogaster


Alignment Length:450 Identity:89/450 - (19%)
Similarity:151/450 - (33%) Gaps:138/450 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LYECLRPVFHVTYIHGLTSFYISCDTKTGKKAIKKTIFGYINGIMHIAMF--------------- 90
            :|..::..|..:...|:||...| :.|.......:| :..|..|:.:.|.               
  Fly     2 VYWMIKLYFRYSLAIGITSQQFS-NRKFFSTLFSRT-YALIANIVTLIMLPIVMWQVQLVFQQKK 64

  Fly    91 VFAYSLTIYNNCESVASYFFRSRITY------FGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQ 149
            .|...:.|.||.....|:..   |.|      |.|     :.|..:..:.||.|   ...:||..
  Fly    65 TFPKLILITNNVREAVSFLV---ILYTVLSRGFRD-----TAFKEMQPLLLTLF---REEKRCGF 118

  Fly   150 KFHTMDVQLQTVGVKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTM-ALHFTF-- 211
            |        ...||:.....:|...:..|..:.:.:|||      :|||::....: .|.|.|  
  Fly   119 K--------GIGGVRRSLRILLFVKFFTLSWLCVTDVLF------LLYSTDALIWVNVLRFFFKC 169

  Fly   212 ----LIQHTVIAIAIAL------FSCFTYLVEMRLVMVNKVLKNLAHQWDTRSLKAVNQKQRSLQ 266
                :::...:...:||      |.|           ||:.|..:.....||       |.|.||
  Fly   170 NTNNILEMVPMGYFLALWHIARGFDC-----------VNRRLDQIVKSKSTR-------KHRELQ 216

  Fly   267 CLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAY----- 326
            .|                    ..:|..:.:.|...||.:..|:|......|:..|..||     
  Fly   217 HL--------------------WLLHACLTKTALNINKIYAPQMLASRFDNFVNGVIQAYWGAVF 261

  Fly   327 -YVLETLLGKSKRESKFKTVEFVTFFSCQ-----MILYLIAIISIVEGSNRAIKKSEKTGGIVHS 385
             :.|.|            ...:|.:.|.|     :..|||        .|......|......||
  Fly   262 TFDLST------------PFFWVVYGSVQYHVRCLDYYLI--------DNMCDVAVEYHDSAKHS 306

  Fly   386 LLNKTKSAEVK--EKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQF 443
            .      :||:  :::..:.:.....|:...:.|||..:|:::|.:..::..|:::||||
  Fly   307 W------SEVRWTKEISSYVIYANSTKLQLWSCGLFQANRSMWFAMISSVLYYILVLLQF 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 86/444 (19%)
Gr59bNP_523818.2 7tm_7 6..364 CDD:285581 87/445 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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