DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr28a

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster


Alignment Length:443 Identity:153/443 - (34%)
Similarity:255/443 - (57%) Gaps:30/443 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FRRFVTAKQLYECLRPVFHVTYIHGLTSFYISCDTKTGKKAIKKTIFGYINGIMHIAMFVFAYSL 96
            :.||..|..:::.|||:..::.: ||..|.::.:.   :|.::.:.|.:..||:|...||..:.:
  Fly     6 WERFSQADNVFQALRPLTFISLL-GLAPFRLNLNP---RKEVQTSKFSFFAGIVHFLFFVLCFGI 66

  Fly    97 TIYNNCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTV 161
            ::... :|:..|||::.||.|.|....::|.:.::.|:..|.....||...:|....:|.....:
  Fly    67 SVKEG-DSIIGYFFQTNITRFSDGTLRLTGILAMSTIFGFAMFKRQRLVSIIQNNIVVDEIFVRL 130

  Fly   162 GVKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAIAIALFS 226
            |:|:.|.::|..|:::.:.|.|.||::...::|:|.|:.::|:.....||.:.|..|::.:..|.
  Fly   131 GMKLDYRRILLSSFLISLGMLLFNVIYLCVSYSLLVSATISPSFVTFTTFALPHINISLMVFKFL 195

  Fly   227 CFTYLVEMRLVMVNKVLKNL--AHQWDTRSLK------AVNQKQRS--LQCLDS-----FSMYTI 276
            |.|.|...|..|:|::|:::  ||.....:|:      .||.::.|  |:.|.|     :|:.::
  Fly   196 CTTDLARSRFSMLNEILQDILDAHIEQLSALELSPMHSVVNHRRYSHRLRNLISTPMKRYSVTSV 260

  Fly   277 VTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESK 341
            :..:|...|::...||:|:|:...|..:||||.||.||:|:||.|:||.:|:||.:| ..||...
  Fly   261 IRLNPEYAIKQVSNIHNLLCDICQTIEEYFTYPLLGIIAISFLFILFDDFYILEAIL-NPKRLDV 324

  Fly   342 FKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQL 406
            |:..||..||..|:|.|::.|:.|||||:|.|..|..|..|||.:||.|...|::::|.:.|:||
  Fly   325 FEADEFFAFFLMQLIWYIVIIVLIVEGSSRTILHSSYTAAIVHKILNITDDPELRDRLFRLSLQL 389

  Fly   407 MHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQF---------TSNSPNN 450
            .|.|:.|||||||.:||||.|||:||.|.|||||:||         :|||.||
  Fly   390 SHRKVLFTAAGLFRLDRTLIFTITGAATCYLIILIQFRFTHHMDDTSSNSTNN 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 143/412 (35%)
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 142/413 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450267
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C1WA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014262
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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