DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr39a

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_724330.1 Gene:Gr39a / 117346 FlyBaseID:FBgn0264556 Length:381 Species:Drosophila melanogaster


Alignment Length:423 Identity:81/423 - (19%)
Similarity:173/423 - (40%) Gaps:98/423 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LTSFYISC--------DTKTGKK--AIKKTIFGYINGIMHIAMFVF-----AYSLTIYNNCESVA 106
            |.::|..|        |....||  .:::::..|   |:|.|:..:     :..:|.:..|    
  Fly     8 LCAYYRLCRYLGIFCIDYNPTKKKFRLRRSVLCY---IVHFALQAYLVGCISVMVTYWRRC---- 65

  Fly   107 SYFFRSRIT----YFGDLMQIVSGFIGVTV------IYLTAFVPNHRLERCLQKFHTMDVQLQTV 161
               |:|.:|    :|..|:.:::  :|:.|      |:|.|  |:.|:.|.::.:.    :....
  Fly    66 ---FKSELTTTGNHFDRLVMVIA--LGILVVQNAWLIWLQA--PHLRIVRQIEFYR----RNHLA 119

  Fly   162 GVKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAIAIALFS 226
            .|:::..|.|.:..:....:::.|.:.|.....:..:|.:....:|.|.  :::.|.:..:..:.
  Fly   120 NVRLLLPKRLLWLIIATNVVYMANFIKTCIFEWLTDASRLFVITSLGFP--LRYLVTSFTMGTYF 182

  Fly   227 CFTYLVEMRLVMVNKVLKNLAHQWDTRSLKAVNQKQRSLQCLDSFSMYTIVTKDPAEIIQESMEI 291
            |..::|  |||:          .|:...:.|:..:...|:          :|......::..:|:
  Fly   183 CMVHIV--RLVL----------DWNQSQINAIIDESADLK----------MTSPNRLRLRVCLEM 225

  Fly   292 HH---LICEAAATANKYFTYQLLTIISIAFLII-VFDAYYVLETLLGKSKRESKFKTVEFV---- 348
            |.   |:|....:    ..|..:..:|..|..: |....|:  |::.::|:....|.:..|    
  Fly   226 HDRLMLLCNDEIS----LVYGFIAWLSWMFASLDVTGVIYL--TMVIQTKKSIVLKLITNVVWLS 284

  Fly   349 -TFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKT--KSAEVKEKLQQFSMQLMHLK 410
             ||.:|.....          |||...::.||.    .:|.|.  ....:...:::|.::.:..|
  Fly   285 PTFMTCAASFM----------SNRVTIQANKTA----KMLTKVPRTGTGLDRMIEKFLLKNLRQK 335

  Fly   411 INFTAAGLFNIDRTLYFTISGALTTYLIILLQF 443
            ...||.|.|.:|::..|.:..|:.||::||:||
  Fly   336 PILTAYGFFALDKSTLFKLFTAIFTYMVILVQF 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 79/421 (19%)
Gr39aNP_724330.1 7tm_7 8..372 CDD:285581 81/423 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450274
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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