DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr58a

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster


Alignment Length:439 Identity:82/439 - (18%)
Similarity:158/439 - (35%) Gaps:108/439 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 YIHGLTSFYISCDTKTGKKAIKKTIFGY------------INGIMHIAMFVFAYSL--TIYNNCE 103
            ||:|:....:....|.|     :.:.||            ..|::.:..|.|.:.:  ..|.:..
  Fly     7 YIYGIGCGLMPAPLKKG-----QFLLGYKQRWYLIYTACLHGGLLTVLPFTFPHYMYDDSYMSSN 66

  Fly   104 SVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQ----------KFHTMDVQL 158
            .|..:.|.     ..::.:|::.|.||.:::.       |.:|.|.          |..|:|.:.
  Fly    67 PVLKWTFN-----LTNITRIMAMFSGVLLMWF-------RRKRILNLGENLILHCLKCKTLDNRS 119

  Fly   159 QTVGVKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAIAIA 223
            :      .|||:.:....||..|.||      ...|:|..:.:  ...:|....|..|  |:.:|
  Fly   120 K------KYSKLRKRVRNVLFQMLLV------ANLSILLGALI--LFRIHSVQRISKT--AMIVA 168

  Fly   224 LFSCFTYLVEM----------------RLVMVNKVLKNLAHQWDTRSLK-AVNQKQRSLQCLDSF 271
            ..:.|.|:|.|                ||.:..|.|.:..:..:..||. :.|:..|||..|   
  Fly   169 HITQFIYVVFMMTGICVILLVLHWQSERLQIALKDLCSFLNHEERNSLTLSENKANRSLGKL--- 230

  Fly   272 SMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKS 336
                      |::.:...|...|:.|...|.:......||.:......::.....:..:|:...|
  Fly   231 ----------AKLFKLFAENQRLVREVFRTFDLPIALLLLKMFVTNVNLVYHGVQFGNDTIETSS 285

  Fly   337 KRESKFKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQ 401
            ......:.|....::|.      :.::::|:...|  :...|.|    .||.:....|:.::  .
  Fly   286 YTRIVGQWVVISHYWSA------VLLMNVVDDVTR--RSDLKMG----DLLREFSHLELVKR--D 336

  Fly   402 FSMQLM----HLKIN---FTAAGLFNIDRTLYFTISGALTTYLIILLQF 443
            |.:||.    ||:.:   :...|||..::.........:...:::|:||
  Fly   337 FHLQLELFSDHLRCHPSTYKVCGLFIFNKQTSLAYFFYVLVQVLVLVQF 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 80/437 (18%)
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 79/425 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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