DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr98c

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:478 Identity:95/478 - (19%)
Similarity:177/478 - (37%) Gaps:157/478 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RRFRRFVTAKQLYECLRPVFHVTYIHGLT---SFYISCDTKTGKKAIKKTIFGYINGIMHIAMFV 91
            :|.|...||       ||...|..:.|||   .|:    |:|.:   |:..|.::.|   .::::
  Fly     6 KRSRLLTTA-------RPYLQVLSLFGLTPPAEFF----TRTLR---KRRRFCWMAG---YSLYL 53

  Fly    92 FAYSLTIYNNCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDV 156
            .|..|.::        |.|.:.|                        |..| ||  :.|||..| 
  Fly    54 IAILLMVF--------YEFHANI------------------------VSLH-LE--IYKFHVED- 82

  Fly   157 QLQTVGVKIMYSKVL----RFSYMVLISMFLVNVLFTGGTFSVLY------------SSEVAPTM 205
                      :|||:    :|..:.:.:...:|:|...|...::|            ||:.....
  Fly    83 ----------FSKVMGRTQKFLIVAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKSSKNFCGK 137

  Fly   206 ALHFTFLIQHTVIAIAIALFSCFTYLVEMRLVM---------VNKVLKNLAHQWDTRSLKAVNQK 261
            :..::|.::   :.::|.|:......|..||.:         ||:||        |:.:..:.|.
  Fly   138 SHWWSFRLR---LTLSIGLWMVIIIGVIPRLTLGRAGPFFHWVNQVL--------TQIILIMLQL 191

  Fly   262 QRSLQCLDSFSMYTIV--TKDPAEIIQESME------------------------IHHLICEAAA 300
            :....||....:|.::  |:...|.:::.:|                        |..|:.|..|
  Fly   192 KGPEYCLFVLLVYELILRTRHVLEQLKDDLEDFDCGARIQELCVTLKQNQLLIGRIWRLVDEIGA 256

  Fly   301 TANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRE------SKFKTVEFVTFFSCQMILYL 359
                ||.:.:.       |:.:::...:|..:.....|.      .:...:..:||.|..::|..
  Fly   257 ----YFRWSMT-------LLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLSFNLLLTC 310

  Fly   360 IAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAE----VKEKLQQFSMQLMHLKINFTAAGLFN 420
            ..       |...:|.......|:|. :....:||    :|..|:::.:|:.|||:.||..|||:
  Fly   311 FF-------SECCVKTYNSISYILHQ-IGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFD 367

  Fly   421 IDRTLYFTISGALTTYLIILLQF 443
            |:..|:..:...|..|:||::||
  Fly   368 INIKLFGGMLVTLCGYVIIIVQF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 89/461 (19%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 91/462 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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