DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28b and Gr98b

DIOPT Version :9

Sequence 1:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster


Alignment Length:382 Identity:78/382 - (20%)
Similarity:151/382 - (39%) Gaps:97/382 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 IVSGFI-GVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIM-YSKVL------RFSYMVLI 179
            :::|:: ..|.|..|.|:.::        |:.:.:..:.:...:. :::|:      .:|.|.:.
  Fly    43 LMTGYVFYATAILATVFIVSY--------FNIIAIDEEVLEYNVSDFTRVMGNIQKSLYSIMAIA 99

  Fly   180 S--MFLVNVLFTGGTFSVLYSSEVAPTMA--------LHFTFLIQHTVIAIAIALFSCFTYLVEM 234
            :  ..|:|....||.:..:...|:....|        ..|:|..:   :|:.:.::.........
  Fly   100 NHLNMLINYRRLGGIYKDIADLEMDMDEASQCFGGQRQRFSFRFR---MALCVGVWMILMVGSMP 161

  Fly   235 RLVM------VNKVLKNLAHQWDTRSLKAVNQKQRSLQ-CLDSFSMYTIVTKDPAEIIQ------ 286
            ||.|      |:.:||.|.      ....:.|:.:||: |:....:|.:|.:....:.|      
  Fly   162 RLTMTAMGPFVSTLLKILT------EFVMIMQQLKSLEYCVFVLIIYELVLRLRRTLSQLQEEFQ 220

  Fly   287 --ESMEIHHLICEA--------------AATANKYFTYQLLTII---SIAFLIIVFDAYYVLETL 332
              |..::...:|.|              ......|||..:|.:.   .:..|.:|..||.     
  Fly   221 DCEQQDMLQALCVALKRNQLLLGRIWRLEGDVGSYFTPTMLLLFLYNGLTILHMVNWAYI----- 280

  Fly   333 LGKSKRESKF---KTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAE 394
                   :||   ...::..|..|..:|..:.:..::  |.|.|........|:|.:  :..||:
  Fly   281 -------NKFLYDSCCQYERFLVCSTLLVNLLLPCLL--SQRCINAYNCFPRILHKI--RCTSAD 334

  Fly   395 -----VKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTT---YLIILLQF 443
                 :...|:::|:|:.|||:.||..|||:|: ..||  .|.|.|   |:|||:||
  Fly   335 PNFAMLTRGLREYSLQMEHLKLRFTCGGLFDIN-LKYF--GGLLVTIFGYIIILIQF 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 76/380 (20%)
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 78/382 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450303
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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