DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr36b and lite-1

DIOPT Version :9

Sequence 1:NP_724039.1 Gene:Gr36b / 117487 FlyBaseID:FBgn0045486 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:432 Identity:77/432 - (17%)
Similarity:162/432 - (37%) Gaps:94/432 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WVVL--LLKAVHIYCYLIGLSNFEFDCRTGRVFKSRRCTIYAFMANIFILITIIYNFTAHG---- 62
            |.:.  .|..::....::||:      ::.|...|....||:::....:|.|.:..|...|    
 Worm    41 WAICDRTLYPIYYLLLILGLN------QSIRPNNSLLFRIYSWLVFCLLLFTTLRKFNQVGVRPN 99

  Fly    63 --DTNLLFQSANKLHEYVIIIMSGLKIVAGLITVLNRWLQRGQMMQLVKDVIRLYMINPQLKSMI 125
              ..||....||.  ..:|.:.:.|.:::||:..|..:....:.::.:| ::..:.:|.:.|...
 Worm   100 GTRENLQEFFANP--RSMITLCNALIMLSGLLASLQLYTLGAKRLKPLK-ILCQFSLNVRTKQAE 161

  Fly   126 RWGILLKAFISFAIELLQVTLSVD-ALDRQG------------TAEMMGLLVKLCVSFIMNLAIS 177
            |...::..|::....||.:|::.. |:.:.|            |..:..:|:.....|:...|||
 Worm   162 RRQFMINTFLAVFSGLLALTMAATYAMSKWGYILYIVGTPNLDTETIFCVLLDSYALFVSRAAIS 226

  Fly   178 QHFLVILLIRAQYRIMNAKLRMVIEESRRLSFLQLRNGAFMTRCCYLSDQLEDIGEVQSQLQSMV 242
               .:.:|......::...::.:|.|         ...|....|......|:.|.:.|...|.: 
 Worm   227 ---ALAILFYQHCSVIRRSIKHLINE---------MVPAEQDECPLPESSLQKIHDCQISYQRI- 278

  Fly   243 GQLDEVFGMQGLMAYSEYYLSIVGTSYMSYSIYKYG---------------PHNLKLSAKTSIIV 292
                    ..|.....|||..::        .|.||               ..::..|...||::
 Worm   279 --------FNGKAVIEEYYSFVL--------FYSYGVCIPIFCFLMFVGMSAQSICWSEVVSIVI 327

  Fly   293 CI-----LITLFYLDA-LVNCNNMLRVLD----HHKDFLGLLEERTVFASSLDIRLEESFESLQL 347
            .|     ::.||.|.| ::|.:....|..    :|:.|   .|||     .|.:..:.:|.:.|:
 Worm   328 WIVNAILVLLLFSLPAFMINEDGDRLVASSFRMYHETF---HEER-----DLTVLSQMTFFTFQI 384

  Fly   348 QLARNPLKINVMGMFPITRGSTAAMCASVIVNSIFLIQFDME 389
            ...:  |.::....|.:.|....::.::::...:.|.:||::
 Worm   385 HSTK--LTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr36bNP_724039.1 7tm_7 9..390 CDD:285581 76/425 (18%)
lite-1NP_509043.3 7tm_7 75..425 CDD:285581 70/392 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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