DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr36b and Gr59b

DIOPT Version :9

Sequence 1:NP_724039.1 Gene:Gr36b / 117487 FlyBaseID:FBgn0045486 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_523818.2 Gene:Gr59b / 117484 FlyBaseID:FBgn0045482 Length:366 Species:Drosophila melanogaster


Alignment Length:418 Identity:74/418 - (17%)
Similarity:154/418 - (36%) Gaps:86/418 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVDWVVLLLKAVHIYCYLIGLSNFEFDCRTGRVFKSRRCTIYAFMANIFILITIIYNFTAHGDTN 65
            ||.|   ::|....|...||:::.:|..|  :.|.:.....||.:|||   :|:|..........
  Fly     1 MVYW---MIKLYFRYSLAIGITSQQFSNR--KFFSTLFSRTYALIANI---VTLIMLPIVMWQVQ 57

  Fly    66 LLFQSANKLHEYVIIIMSGLKIVAGLITVLNRWLQRGQMMQLVKDVIRLYMINPQLKSM------ 124
            |:||. .|....:|:|.:.::.....:.:|...|.||......|:      :.|.|.::      
  Fly    58 LVFQQ-KKTFPKLILITNNVREAVSFLVILYTVLSRGFRDTAFKE------MQPLLLTLFREEKR 115

  Fly   125 --------IRWGILLKAFISF-------AIELLQVTLSVDALDRQGTAEMMGLLVKLCVSFIMNL 174
                    :|..:.:..|:.|       ..::|.:..|.|||.   ...::....|...:.|:.:
  Fly   116 CGFKGIGGVRRSLRILLFVKFFTLSWLCVTDVLFLLYSTDALI---WVNVLRFFFKCNTNNILEM 177

  Fly   175 AISQHFLVILLIRAQYRIMNAKLRMVIEESRRLSFLQLRNGAFMTRCCYLSDQLEDIGEVQSQLQ 239
            ....:||.:..|...:..:|.:|..:::........:|:: .::...|.....|           
  Fly   178 VPMGYFLALWHIARGFDCVNRRLDQIVKSKSTRKHRELQH-LWLLHACLTKTAL----------- 230

  Fly   240 SMVGQLDEVFGMQGLMAYSEYYLSIVGTSYMSYSIYKYGPHNLKLSAKTSIIVCILITLFYLDAL 304
                .:::::..|.|.:..:.:::.|..:|..                 ::....|.|.|:....
  Fly   231 ----NINKIYAPQMLASRFDNFVNGVIQAYWG-----------------AVFTFDLSTPFFWVVY 274

  Fly   305 VNCNNMLRVLDHHKDFLGLLEERTVFA---------SSLDIRLEESFESLQLQLARNPLKINVMG 360
            .:....:|.||::     |::.....|         |..::|..:...|..:......|::...|
  Fly   275 GSVQYHVRCLDYY-----LIDNMCDVAVEYHDSAKHSWSEVRWTKEISSYVIYANSTKLQLWSCG 334

  Fly   361 MFPITRGSTAAMCASVIVNSIFLIQFDM 388
            :|...|....||.:||:...:.|:||.:
  Fly   335 LFQANRSMWFAMISSVLYYILVLLQFHL 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr36bNP_724039.1 7tm_7 9..390 CDD:285581 71/410 (17%)
Gr59bNP_523818.2 7tm_7 6..364 CDD:285581 71/410 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.