DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr36c and Gr98a

DIOPT Version :9

Sequence 1:NP_724040.1 Gene:Gr36c / 117486 FlyBaseID:FBgn0045485 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_651564.1 Gene:Gr98a / 43305 FlyBaseID:FBgn0039520 Length:391 Species:Drosophila melanogaster


Alignment Length:407 Identity:80/407 - (19%)
Similarity:146/407 - (35%) Gaps:109/407 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YYGLFIGLSNFEFDWNTGRVFTKKWSTLYAIALDSCIFALYIYHWTGNTNIVNAIFGRANMLHEY 77
            |..||:.|.           |:..|.              :.:.:..:.:.:|..|.....|..:
  Fly    39 YVLLFVSLG-----------FSSYWR--------------FSFDYEFDYDFLNDRFSSTIDLSNF 78

  Fly    78 VVAILTGLRIVTGLFTLILRWYQRCKMMDLASKVVRMYV--------ARPQVRRMSRWGILTKFI 134
            |..:|....||     |.|.|....|.:|...:.:...:        :..:|||...|      |
  Fly    79 VALVLGHAIIV-----LELLWGNCSKDVDRQLQAIHSQIKLQLGTSNSTDRVRRYCNW------I 132

  Fly   135 FGSITDGLQMAMVLSAMGSVDSQFYLGLGLQYWMFVILNMAMMQQH----MIMLFVRTQFQLINT 195
            :||    |.:..::..:.::.|...|.:...|...|.|  |...:.    .::||:   :|.:..
  Fly   133 YGS----LIIRWLIFIVVTIYSNRALTINATYSELVFL--ARFSEFTLYCAVILFI---YQELIV 188

  Fly   196 ELRQVIDEAKDLLLSPRHQGVFMTKCCSLADQIENIARIQS----------------QLQTIMNQ 244
            ....|:||    |...|:: ::..:..||    :.:|::|:                || :::..
  Fly   189 GGSNVLDE----LYRTRYE-MWSIRRLSL----QKLAKLQAIHNSLWQAIRCLECYFQL-SLITL 243

  Fly   245 MEEVFGIQGAMTYGGYYLSSVGTCYLAYSILKHGYENLSMTLSTVILAY--SWCFFYYLDGMLN- 306
            :.:.|....|:.| ..|||.|....:|........|.:.: |..|:..|  :.|     |.|.. 
  Fly   244 LMKFFIDTSALPY-WLYLSRVEHTRVAVQHYVATVECIKL-LEIVVPCYLCTRC-----DAMQRK 301

  Fly   307 -LSVMLHVQDDYWEMLQILGKRTIFVGLDVRLEEAFENLNLQLIRNPLKITVVKLYDVTRSNTMA 370
             ||:...|..|         :|:      .:|..|..:|||||.:...|.:...:.|:.......
  Fly   302 FLSMFYTVTTD---------RRS------SQLNAALRSLNLQLSQEKYKFSAGGMVDINTEMLGK 351

  Fly   371 MFGNLITHSIFLIQYDI 387
            .|..:|::.:..||:.|
  Fly   352 FFFGMISYIVICIQFSI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr36cNP_724040.1 7tm_7 8..389 CDD:285581 80/407 (20%)
Gr98aNP_651564.1 7tm_7 13..370 CDD:285581 80/407 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.