DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr36c and Gr59e

DIOPT Version :9

Sequence 1:NP_724040.1 Gene:Gr36c / 117486 FlyBaseID:FBgn0045485 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_788431.1 Gene:Gr59e / 37725 FlyBaseID:FBgn0041233 Length:399 Species:Drosophila melanogaster


Alignment Length:425 Identity:93/425 - (21%)
Similarity:164/425 - (38%) Gaps:103/425 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YYYGLFIGLSNFEFDWNTGRVFTKKW-STLYAIALDSCIFALYIYHWTGNTNIVNAIFGRANMLH 75
            |:..|.:.::.|...:.:|||...:| .||:::       .|.:|.|||  :||..:        
  Fly     5 YWENLLLTINRFLGVYPSGRVGVLRWLHTLWSL-------FLLMYIWTG--SIVKCL-------- 52

  Fly    76 EYVVAILTGLRIVTGLFTLILRWYQRCKMMDLASKVVRMYVA---RP-------QVRRM------ 124
            |:.|.|.|..::      |.|..:..    ::|:..:.:|.|   ||       |:.|:      
  Fly    53 EFTVEIPTIEKL------LYLMEFPG----NMATIAILVYYAVLNRPLAHGAELQIERIITGLKG 107

  Fly   125 -------SRWGILTKFIFGS--ITDGLQMAMVLSAMGSVDSQFYLGLGLQYWMF--------VIL 172
                   .|.|..|..:..:  :..||   .||..:.:.|.:|:     ..|..        :::
  Fly   108 KAKRLVYKRHGQRTLHLMATTLVFHGL---CVLVDVVNYDFEFW-----TTWSSNSVYNLPGLMM 164

  Fly   173 NMAMMQQHMIMLFVRTQFQLINTELRQVIDEAKDLLLSPRHQGVFMTKC-----CSLADQIENIA 232
            ::.::|....:.|:    .|:..::|..:.|.| ||..|......:..|     ..|.|.....|
  Fly   165 SLGVLQYAQPVHFL----WLVMDQMRMCLKELK-LLQRPPQGSTKLDACYESAFAVLVDAGGGSA 224

  Fly   233 RIQSQLQTIMNQMEEVFGIQGAMTYGGYYL-----SSVGTCYLAYSILKHGYENLSMTLSTVILA 292
            .:..:::...|.:|:|.. |..:.:|.|.:     |.|..|...|.|.  .:....:...:|:|.
  Fly   225 LMIEEMRYTCNLIEQVHS-QFLLRFGLYLVLNLLNSLVSICVELYLIF--NFFETPLWEESVLLV 286

  Fly   293 YSWCFFYYLDGML--NLSVMLHVQDDYWEMLQILGKRTIFVGLDV---RLEEAFENLNLQLIRN- 351
            |...:.....|.:  .|||...:.:....:.|:|.:      |:|   ||:.......|||.|: 
  Fly   287 YRLLWLAMHGGRIWFILSVNEQILEQKCNLCQLLNE------LEVCSSRLQRTINRFLLQLQRSI 345

  Fly   352 --PLKITVVKLYDVTRSNTMAMFGNLITHSIFLIQ 384
              ||:...:...| ||| .....|.|:...|||||
  Fly   346 DQPLEACGIVTLD-TRS-LGGFIGVLMAIVIFLIQ 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr36cNP_724040.1 7tm_7 8..389 CDD:285581 93/425 (22%)
Gr59eNP_788431.1 7tm_7 9..381 CDD:285581 92/421 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.