DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr36c and egl-47

DIOPT Version :9

Sequence 1:NP_724040.1 Gene:Gr36c / 117486 FlyBaseID:FBgn0045485 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:408 Identity:69/408 - (16%)
Similarity:143/408 - (35%) Gaps:130/408 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AIALDSCIFALYIYHWTGNTNIVNAIFGRANMLHEYVVA-ILTGLRIVTGLFTLIL-----RWYQ 100
            |:.|:|.:..:       |..::.....:..::|...|| ::|..:.|..:|.::|     :.:|
 Worm   153 AVLLNSFLIKM-------NFKVLMLYKHKFGLMHTGTVASMITATKPVINVFVIVLSAIKFKSHQ 210

  Fly   101 R-CKMMDLASKVVR-MYVARPQVRRMSRWGILTKFI-FGSITDGLQMAMVLSAMGSV-------- 154
            | .|.:|:.....| .:...|.:|       :.||: |.::......|::|..:..|        
 Worm   211 RLLKTIDMVDVCFRSAFGVSPPLR-------IYKFVFFFTLLIIFFSALILKVVEFVGTGEIFGE 268

  Fly   155 ----DSQFYLGLGLQYWMFVILNMAMMQQHMIMLFVRTQFQLINTELRQVIDEAKDLLLSPRHQG 215
                |..|.|...|..|..:.|....:...::..:.||..:.:|.|.::            ||  
 Worm   269 HILTDCSFILVPVLSLWNIIPLLYYHLYNILVRFYCRTLIKSMNREHKK------------RH-- 319

  Fly   216 VFMTKCCSLADQIENIARIQSQLQTIMNQMEEVFGIQGA-----MTYGGYYLSS----------- 264
             |..|  ...:|...|..:|..:..:.|.: .:|.:..:     :|.  |:||.           
 Worm   320 -FSLK--FYYEQFTRITNVQEAVGDVFNPL-LLFSLAWSLLVLCLTL--YFLSEPTSTLLVPITP 378

  Fly   265 -----------------VGTCYLAYSILKHGYENLSMTLSTVILAYSWCFFYYLDGMLN------ 306
                             |..|:.||.::        |.:..:|:..|       .||:.      
 Worm   379 EQVTNPKIREKLNITVHVKICWAAYQVV--------MAILHIIIICS-------TGMMTNETTRQ 428

  Fly   307 -LSVMLHVQDDY---WEMLQILGKRTIFVGLDVRLEEAFENLNLQLIRNPLKITVVKLYDVTRSN 367
             ::.:|.:..|.   .:..||    :.||          ..:..|.:..   :||.:.:.:.|:.
 Worm   429 IVNAVLRIVPDANADLDRFQI----SCFV----------HKMTTQFMWG---MTVWRAFPLERTT 476

  Fly   368 TMAMFGNLITHSIFLIQY 385
            ...:...::|:|:.|.::
 Worm   477 FFTLISVIVTYSLLLFRF 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr36cNP_724040.1 7tm_7 8..389 CDD:285581 69/408 (17%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:303125 69/408 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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