DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr59a and Gr22d

DIOPT Version :9

Sequence 1:NP_726287.2 Gene:Gr59a / 117485 FlyBaseID:FBgn0045483 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster


Alignment Length:411 Identity:85/411 - (20%)
Similarity:151/411 - (36%) Gaps:109/411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YNVYAVFIGMTSYETMGGKFRQSRITRIYCLLINAIFLTLLP-------------SAFWKSAKLL 59
            |:.:.:.|....||....:.|:|....::.::|::..|.|:.             ..|.::|.|.
  Fly    22 YSSWLLGIFPFKYEPKKRRLRRSMWLILFGVVISSSLLILMVKQSAEDREHGIMLDVFQRNALLY 86

  Fly    60 STADWMPSYMRVTPYI-MCTINYAAIAYTL-ISRCYRDAMLMD------------------LQR- 103
            .    :.|.|.|...: :||::...:..:. :...|...||::                  :|: 
  Fly    87 Q----ISSLMGVVGVVSICTVHLRTLWRSKHLEEIYNGLMLLEAKYFCSNAVECPAFDGYVIQKG 147

  Fly   104 IVLEVN---REMLRTGKK------MNSLLRRMFFLKTFTLTYSCLSYIL-AVFIYQWKAQNWSNL 158
            :|:.|.   ..|:..|..      :|.|:..|..|.|..|   .|.|.| .|.||::        
  Fly   148 VVIVVGLLAPWMVHFGMPDSKLPVLNVLVVSMVKLGTLLL---ALHYHLGVVIIYRF-------- 201

  Fly   159 CNGLLVNISLTILFVNTFFYFTSLWHIARGYDFVNQQLNEIVACQSMDLERKSKELRGLWALHRN 223
                                   :|       .:|::|..:|.....:.:..|..:|.|..|:..
  Fly   202 -----------------------VW-------LINRELLSLVCSLRGNHKGSSSRVRFLLKLYNK 236

  Fly   224 LSYTARRINKHYGPQMLAMRFDYFIFSIINACIGTIYSTTDQEPSLEKI--FGSLIYW----VRS 282
            |.....::...|..|.:.|...:...:||......:|..     ||.|:  |..||.:    ..:
  Fly   237 LVNLYSKLADCYDCQTVLMMAIFLAANIIVCFYMIVYRI-----SLSKMSFFVMLIMFPLAIANN 296

  Fly   283 F-DFFLNDYICDLVSEYQMQP----KFFAPESSMSNEL----SSYLIYESSTRLDLLVCGLYRVN 338
            | ||:|:..:|||:.:...|.    |.|....:|..:|    |.:.:|.|..|...|.|||:.||
  Fly   297 FMDFWLSMKVCDLLQKTGRQTSMILKLFNDIENMDKDLEISISDFALYCSHRRFKFLHCGLFHVN 361

  Fly   339 KRKWLQMVGSIVVHSSMLFQF 359
            :....:|..:.|::...|.||
  Fly   362 REMGFKMFVASVLYLLYLVQF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59aNP_726287.2 7tm_7 7..363 CDD:285581 85/411 (21%)
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 85/411 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.