DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr59a and Gr28b

DIOPT Version :9

Sequence 1:NP_726287.2 Gene:Gr59a / 117485 FlyBaseID:FBgn0045483 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster


Alignment Length:417 Identity:74/417 - (17%)
Similarity:150/417 - (35%) Gaps:102/417 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GMTSY----ETMGGKFRQSRITRIYCLLINAIFLTLLPSAFWKSAKLLSTADWMPSYM---RVT- 72
            |:||:    :|..||   ..|.:.....||.| :.:....|..|..:.:..:.:.||.   |:| 
  Fly    56 GLTSFYISCDTKTGK---KAIKKTIFGYINGI-MHIAMFVFAYSLTIYNNCESVASYFFRSRITY 116

  Fly    73 ---------PYIMCTINY--AAIAYTLISRCYRDAMLMDLQRIVLEVNREMLRTGKKMNSLLRRM 126
                     .:|..|:.|  |.:....:.||.:....||:|...:.|.....:..:....:|..|
  Fly   117 FGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIMYSKVLRFSYMVLISM 181

  Fly   127 FFLK------TFTLTYSC-LSYILAV---FIYQWKAQNWSNLCNGLLVNISLTILFVNTFFYFTS 181
            |.:.      ||::.||. ::..:|:   |:.|...             |::.|...:.|.|...
  Fly   182 FLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTV-------------IAIAIALFSCFTYLVE 233

  Fly   182 L---------------WHIARGYDFVNQQ-----------LNEIVACQSMDLERKSKELRGLWAL 220
            :               |. .|....|||:           :..||.....::.::|.|      :
  Fly   234 MRLVMVNKVLKNLAHQWD-TRSLKAVNQKQRSLQCLDSFSMYTIVTKDPAEIIQESME------I 291

  Fly   221 HRNLSYTARRINKHYGPQMLAMRFDYFIFSIINA--CIGTIYSTTDQEPSLEKIFGSLIYWVRSF 283
            |..:...|...||::..|:|.:....|:..:.:|  .:.|:...:.:|...:     .:.:|..|
  Fly   292 HHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFK-----TVEFVTFF 351

  Fly   284 DFFLNDYICDLVS-------EYQMQPKFFAPESSMSNELSSYLIYES---------STRLDLLVC 332
            ...:..|:..::|       ..:...|......|:.|:..|..:.|.         ..:::....
  Fly   352 SCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAA 416

  Fly   333 GLYRVNKRKWLQMVGSIVVHSSMLFQF 359
            ||:.:::..:..:.|::..:..:|.||
  Fly   417 GLFNIDRTLYFTISGALTTYLIILLQF 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59aNP_726287.2 7tm_7 7..363 CDD:285581 74/417 (18%)
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 72/415 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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