DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr64c and Gr64e

DIOPT Version :9

Sequence 1:NP_001246610.1 Gene:Gr64c / 117479 FlyBaseID:FBgn0045477 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001027106.1 Gene:Gr64e / 3771916 FlyBaseID:FBgn0045476 Length:460 Species:Drosophila melanogaster


Alignment Length:417 Identity:117/417 - (28%)
Similarity:199/417 - (47%) Gaps:60/417 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TLQHAIGPVLVIAQFFGVLPVAGVWPSCRPERVRFRWISLSLLAALILFVFSIVDCALSSKVVFD 76
            :.|.||.|||:|||.|.::||..| .|...|.:.|.|.|:....||:..:|    ..:||     
  Fly    69 SFQEAIKPVLIIAQIFALMPVRKV-SSKFAEDLTFTWFSVRSYYALVTILF----FGVSS----- 123

  Fly    77 HGLKIYTIGSLSFSV----ICIFCFGVFLL------LSRRWPYIIRR----TAECEQIFLEPEYD 127
             |..:..:.|:||:.    ..:|...:||:      |:|:||.|.:.    .|:...:.|..|  
  Fly   124 -GYMVAFVTSVSFNFDSVETLVFYLSIFLISLSFFQLARKWPEIAQSWQLVEAKLPPLKLPKE-- 185

  Fly   128 CSYGRGYSSRLRLWGVCMLVAALCEHSTYVGSALYNNHLAIVECKLDANFWQNYFQR--ERQ-QL 189
               .|..:..:.:..:.....:|.||               :...|...::.|...|  :|. ..
  Fly   186 ---RRSLAQHINMITIVATTCSLVEH---------------IMSMLSMGYYVNSCPRWPDRPIDS 232

  Fly   190 FLIMHFTAWWIPFIEWT----------TLSMTFVWNFVDIFLILICRGMQMRFQQMHWRIRQHVR 244
            ||.:.|::.:. |:::|          .:..||.|||.|||::.:...:..||:|::..:.:..|
  Fly   233 FLYLSFSSVFY-FVDYTRFLGIVGKVVNVLSTFAWNFNDIFVMAVSVALAARFRQLNDYMMREAR 296

  Fly   245 QQMPNEFWQRIRCDLLDLSDLLGIYDKELSGLIVLSCAHNMYFVCVQIYHSFQSKGNYADELYFW 309
            .....::|.:.|.:..:|..|....|..:|.:.:|..::|:||:|.:|..|.|:|.:....||||
  Fly   297 LPTTVDYWMQCRINFRNLCKLCEEVDDAISTITLLCFSNNLYFICGKILKSMQAKPSIWHALYFW 361

  Fly   310 FCLSYVIIRVLNMMFAASSIPQEAKEISYTLYEIPTEFWCVELRRLNEIFLSDHFALSGKGYFLL 374
            |.|.|::.|.|.:...:|||..|:|........:|.|:||.||:|.:|....|:.||:|..:|.|
  Fly   362 FSLVYLLGRTLILSLYSSSINDESKRPLVIFRLVPREYWCDELKRFSEEVQMDNVALTGMKFFRL 426

  Fly   375 TRRLIFAMAATLMVYELVLINQMAGSE 401
            ||.::.::|.|::.|||:|: |..|.|
  Fly   427 TRGVVISVAGTIVTYELILL-QFNGEE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr64cNP_001246610.1 Trehalose_recp 1..407 CDD:253587 117/417 (28%)
Gr64eNP_001027106.1 Trehalose_recp 58..458 CDD:253587 117/417 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469300
Domainoid 1 1.000 57 1.000 Domainoid score I7218
eggNOG 1 0.900 - - E1_28M3V
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I4041
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21421
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.890

Return to query results.
Submit another query.