DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr64f and Gr5a

DIOPT Version :9

Sequence 1:NP_728924.2 Gene:Gr64f / 117477 FlyBaseID:FBgn0052255 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_511050.1 Gene:Gr5a / 44873 FlyBaseID:FBgn0003747 Length:444 Species:Drosophila melanogaster


Alignment Length:453 Identity:193/453 - (42%)
Similarity:289/453 - (63%) Gaps:15/453 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LRRLKKRVTRTSLFRKLDLVHESARKKAFQESCETYKNQIENEYEIRNSLPKLSRSDKEAFLSDG 75
            :|:||.|.......|     |...:.|.:.::.::...|| .|.::|.:        ::.||.||
  Fly     1 MRQLKGRNRCNRAVR-----HLKVQGKMWLKNLKSGLEQI-RESQVRGT--------RKNFLHDG 51

  Fly    76 SFHQAVGRVLLVAEFFAMMPVKGVTGKHPSDLSFSWRNIRTCFSLLFIASSLANFGLSLFKVLNN 140
            |||:||..||.||:.|.:|||.|::......|||:.|:.|..:|.|::.|:..:...|:.:|.::
  Fly    52 SFHEAVAPVLAVAQCFCLMPVCGISAPTYRGLSFNRRSWRFWYSSLYLCSTSVDLAFSIRRVAHS 116

  Fly   141 PISFNSIKPIIFRGSVLLVLIVALNLARQWPQLMMYWHTVEKDLPQYKTQLTKWKMGHTISMVML 205
            .:...|::||:|..|:|:.....||||:.||.||.:|..||:.||.|...|.:.:....:.:|..
  Fly   117 VLDVRSVEPIVFHVSILIASWQFLNLAQLWPGLMRHWAAVERRLPGYTCCLQRARPARRLKLVAF 181

  Fly   206 LGMMLSFAEHILSMVSAINYASFCNRTADPIQNYFLRTNDEIFFVTSYSTTLALWGKFQNVFSTF 270
            :.:::|..||:||::|.: |..||.|.:||:::|.|..:.::|.|..||..||..||.|||..||
  Fly   182 VLLVVSLMEHLLSIISVV-YYDFCPRRSDPVESYLLGASAQLFEVFPYSNWLAWLGKIQNVLLTF 245

  Fly   271 IWNYMDLFVMIVSIGLASKFRQLNDDLRNFKGMNMAPSYWSERRIQYRNICILCDKMDDAISLIT 335
            .|:|||:|:|::.:||:....:||..|.......|..:||:..|..||:|..|..::|||:|.|.
  Fly   246 GWSYMDIFLMMLGMGLSEMLARLNRSLEQQVRQPMPEAYWTWSRTLYRSIVELIREVDDAVSGIM 310

  Fly   336 MVSFSNNLYFICVQLLRSLNTMPSVAHAVYFYFSLIFLIGRTLAVSLYSSSVHDESRLTLRYLRC 400
            ::||.:||||||:|||:|:|||||.||||||||||:||:.|:.||.|:.|:::|::|..||.||.
  Fly   311 LISFGSNLYFICLQLLKSINTMPSSAHAVYFYFSLLFLLSRSTAVLLFVSAINDQAREPLRLLRL 375

  Fly   401 VPKESWCPEVKRFTEEVISDEVALTGMKFFHLTRKLVLSVAGTIVTYELVLIQFHEDNDLWDC 463
            ||.:.:.|||.||..|:.||:|||||:|||::||||.|::|||:.||||||||||||...|||
  Fly   376 VPLKGYHPEVFRFAAELASDQVALTGLKFFNVTRKLFLAMAGTVATYELVLIQFHEDKKTWDC 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr64fNP_728924.2 Trehalose_recp 56..462 CDD:253587 180/405 (44%)
Gr5aNP_511050.1 7tm_7 46..437 CDD:303125 179/391 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469283
Domainoid 1 1.000 57 1.000 Domainoid score I7218
eggNOG 1 0.900 - - E1_28M3V
Homologene 1 1.000 - - H84343
Inparanoid 1 1.050 325 1.000 Inparanoid score I4790
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D26731at7147
OrthoFinder 1 1.000 - - FOG0014346
OrthoInspector 1 1.000 - - otm50918
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21421
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11781
1110.900

Return to query results.
Submit another query.