DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr77a and Gr28a

DIOPT Version :9

Sequence 1:NP_730560.1 Gene:Gr77a / 117476 FlyBaseID:FBgn0045474 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster


Alignment Length:480 Identity:102/480 - (21%)
Similarity:167/480 - (34%) Gaps:179/480 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NWSPRGIKRVRQSLYLRIHGCV-MLIFVGCF--------SPFAFWCIFQRMAFLRQNRILLMIGF 109
            |.:||  |.|:.|.:....|.| .|.||.||        |...::  ||.......:..|.:.| 
  Fly    36 NLNPR--KEVQTSKFSFFAGIVHFLFFVLCFGISVKEGDSIIGYF--FQTNITRFSDGTLRLTG- 95

  Fly   110 NRYVLLLVCAFMTLW-IHCFKQAEIIGCLNRLLKCRRRLRRLMHTRKLKDSMDCLATKGHLLEV- 172
                   :.|..|:: ...||              |:||..::....:.|  :.....|..|:. 
  Fly    96 -------ILAMSTIFGFAMFK--------------RQRLVSIIQNNIVVD--EIFVRLGMKLDYR 137

  Fly   173 VVLLSSYLLSMAQPIQILKDDPEVRRNFMYAC---SLV--------FVSVCQ-AILQLSLGMYTM 225
            .:||||:|:|:..          :..|.:|.|   ||:        ||:... |:..:::.:...
  Fly   138 RILLSSFLISLGM----------LLFNVIYLCVSYSLLVSATISPSFVTFTTFALPHINISLMVF 192

  Fly   226 AILFLGHLVRHSNLLLAKILADA--EHIFESSQKAGFWPNRQELYKGQQKWLALELWRLLH--VH 286
            ..|....|.|....:|.:||.|.  .||.:.|                    |||| ..:|  |:
  Fly   193 KFLCTTDLARSRFSMLNEILQDILDAHIEQLS--------------------ALEL-SPMHSVVN 236

  Fly   287 H---------------------------------QLLKLHRSICSLCAVQAVCFLGFVPLECTIH 318
            |                                 |:..:|..:|.:|.              ||.
  Fly   237 HRRYSHRLRNLISTPMKRYSVTSVIRLNPEYAIKQVSNIHNLLCDICQ--------------TIE 287

  Fly   319 LFFTY-----------FMKYSKFIL------RKYGRSFPLNYFAIAFLVGLFTNLLLVILPTYYS 366
            .:|||           |:.:..|.:      .|....|..:.|...||:.|...:::::|     
  Fly   288 EYFTYPLLGIIAISFLFILFDDFYILEAILNPKRLDVFEADEFFAFFLMQLIWYIVIIVL----- 347

  Fly   367 ERRFNCTREIIKGGG-----LAFPSRITVK--------QLRHTMHFYGLYLKNVEHVFAVSACGL 418
                     |::|..     .::.:.|..|        :||..:....|.|.:.:.:|  :|.||
  Fly   348 ---------IVEGSSRTILHSSYTAAIVHKILNITDDPELRDRLFRLSLQLSHRKVLF--TAAGL 401

  Fly   419 FKLNNAILFCIVGAILEYLMILIQF 443
            |:|:..::|.|.||...||:|||||
  Fly   402 FRLDRTLIFTITGAATCYLIILIQF 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr77aNP_730560.1 7tm_7 37..444 CDD:285581 102/480 (21%)
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 102/480 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.