DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr92a and Gr43a

DIOPT Version :9

Sequence 1:NP_732489.2 Gene:Gr92a / 117473 FlyBaseID:FBgn0045471 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster


Alignment Length:485 Identity:91/485 - (18%)
Similarity:162/485 - (33%) Gaps:140/485 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QMSAPKLSTSILRYIFRYAQFIGVIFFCLHTRKDDKTVFI-RNWLKWLNVTHRIITFTRFFWVY- 69
            ::|.|.:....:..:...|.:..|       |.....|.| |:||  ..|....:|....|..| 
  Fly     2 EISQPSIGIFYISKVLALAPYATV-------RNSKGRVEIGRSWL--FTVYSATLTVVMVFLTYR 57

  Fly    70 ------------IASISIK--TNRVLQVLHGMRLVLSIPNVAVILC--YHIFRGPEIIDLINQFL 118
                        .||..:|  |::|:..|....:|::|  |:.:.|  :.:....|:.|.:|:..
  Fly    58 GLLFDANSEIPVRASFRMKSATSKVVTALDVSVVVMAI--VSGVYCGLFSLNDTLELNDRLNKID 120

  Fly   119 RLFRQVSDLFKTKTPGFGGRRELILILLNLISFAHEQTYLWFTIRKGFS-----WRFLIDWWCDF 178
            ......::..:.:....|.....:|.:..|:..   ....|..|.:..:     ....:.|:..|
  Fly   121 NTLNAYNNFRRDRWRALGMAAVSLLAISILVGL---DVGTWMRIAQDMNIAQSDTELNVHWYIPF 182

  Fly   179 YLV--SATNIFIHINSIGYLSLGVLYSELNKYVYTNLRIQLQKLN-TSGSK-QKIRRVQNRLEKC 239
            |.:  ..|.:.::|.:..| .||..:..||:.:.::.   |.:.| ||..| ||:..|:|     
  Fly   183 YSLYFILTGLQVNIANTAY-GLGRRFGRLNRMLSSSF---LAENNATSAIKPQKVSTVKN----- 238

  Fly   240 ISLYR----EIYHTSI-----------------MFHKLFVPLLFLALIY-----KVLLIALI--- 275
            :|:.|    ...|.|:                 ....|.:.:..|.|.|     |.||:..:   
  Fly   239 VSVNRPAMPSALHASLTKLNGETLPSEAAGDKAAARSLILNVELLKLGYFPAKNKGLLLKSLADS 303

  Fly   276 -------------GFNVAVEFYLNS----------FIFWILLGK---------------HVLDLF 302
                         .|.:||.|.|.|          |:|..||.|               |.|.|.
  Fly   304 HESLGKCVHLLSNSFGIAVLFILVSCLLHLVATAYFLFLELLSKRDNGYLWVQMLWICFHFLRLL 368

  Fly   303 LV-------------TVSVEGAVNQFLNIGMQFGNVGDLSKFQTTLDTLFLHLRLGHFRVSILGL 354
            :|             |:.:...:.:.::..:....|....:....:|..|          |..||
  Fly   369 MVVEPCHLAARESRKTIQIVCEIERKVHEPILAEAVKKFWQQLLVVDADF----------SACGL 423

  Fly   355 FDVTQMQYLQFLSALLSGLAFIAQYRMQVG 384
            ..|.:.....|.||:.:.|..:.|::...|
  Fly   424 CRVNRTILTSFASAIATYLVILIQFQRTNG 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr92aNP_732489.2 7tm_7 18..382 CDD:285581 88/470 (19%)
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 88/471 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.