DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr92a and egl-47

DIOPT Version :9

Sequence 1:NP_732489.2 Gene:Gr92a / 117473 FlyBaseID:FBgn0045471 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:372 Identity:66/372 - (17%)
Similarity:132/372 - (35%) Gaps:130/372 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IITFTR----FFWVYIASISIKTNRVLQVLHGMRLVLSIPNVAVILCYHIFRGPEIIDLINQFLR 119
            :||.|:    .|.:.:::|..|:::        ||:.:|..|.|  |:....|      ::..||
 Worm   186 MITATKPVINVFVIVLSAIKFKSHQ--------RLLKTIDMVDV--CFRSAFG------VSPPLR 234

  Fly   120 LFRQVSDLFKTKTPGFGGRRELILI-----LLNLISFAHEQTYLWFTIRKG--FSWRFLIDWWCD 177
            :::.|  .|.|          |::|     :|.::.|          :..|  |....|.|  |.
 Worm   235 IYKFV--FFFT----------LLIIFFSALILKVVEF----------VGTGEIFGEHILTD--CS 275

  Fly   178 FYLVSATNIFIHINSIGYLSLGVLYSELNKYVYTNLRIQLQKLNTSGSKQKIRRVQNRLEKCISL 242
            |.||...:::..|..:.|    .||:.|.::.   .|..::.:|....|:               
 Worm   276 FILVPVLSLWNIIPLLYY----HLYNILVRFY---CRTLIKSMNREHKKR--------------- 318

  Fly   243 YREIYHTSIMFH---------------KLFVPLLFLALIYKVLLIALIGF--------------- 277
                 |.|:.|:               .:|.|||..:|.:.:|::.|..:               
 Worm   319 -----HFSLKFYYEQFTRITNVQEAVGDVFNPLLLFSLAWSLLVLCLTLYFLSEPTSTLLVPITP 378

  Fly   278 ----NVAVEFYLNSF----IFW-----ILLGKHVLDLFLVTVSVEGAVNQFLNIGMQF---GNVG 326
                |..:...||..    |.|     ::...|::.:....:.......|.:|..::.   .| .
 Worm   379 EQVTNPKIREKLNITVHVKICWAAYQVVMAILHIIIICSTGMMTNETTRQIVNAVLRIVPDAN-A 442

  Fly   327 DLSKFQTTLDTLFLHLRLGHFR--VSILGLFDVTQMQYLQFLSALLS 371
            ||.:||.   :.|:|.....|.  :::...|.:.:..:...:|.:::
 Worm   443 DLDRFQI---SCFVHKMTTQFMWGMTVWRAFPLERTTFFTLISVIVT 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr92aNP_732489.2 7tm_7 18..382 CDD:285581 66/372 (18%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:303125 66/372 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.