DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr93b and Gr58b

DIOPT Version :9

Sequence 1:NP_732664.2 Gene:Gr93b / 117472 FlyBaseID:FBgn0045470 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_523808.2 Gene:Gr58b / 37502 FlyBaseID:FBgn0041238 Length:408 Species:Drosophila melanogaster


Alignment Length:439 Identity:83/439 - (18%)
Similarity:172/439 - (39%) Gaps:117/439 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGLLVMPRILRCLNVSRISAILLRSCFLYGTFFGV-----ITFRIERKDSQLVAINRRGYLWIC 60
            ||..|.:....:||.:.::|    |:..:|..|.|:     :.|.:.|       |...||:...
  Fly    23 MSTTLRIRSCRKCLRLEKVS----RTYTIYSFFVGIFLFLNLYFMVPR-------IMEDGYMKYN 76

  Fly    61 LVIRLLASCFYGYSYDAWSGQYEDMYLRAFFGFRLIGCLICSVIILVMQFWF-GEELINLVNRFL 124
            :|::             |: .:..::|||.           :|:......|. ..::|.|....|
  Fly    77 IVLQ-------------WN-FFVMLFLRAI-----------AVVSCYGTLWLKRHKIIQLYKYSL 116

  Fly   125 QLFRRMQSLTNS--PKNRFGDRAEFL--LMFSKVFSLLFVFMA-----FRLM--LSPWFLLTLVC 178
            ..::|...:|.:  .|....|..|.|  :|..|:..|...|:.     ::|:  ::|...|....
  Fly   117 IYWKRFGHITRAIVDKKELLDLQESLARIMIRKIILLYSAFLCSTVLQYQLLSVINPQIFLAFCA 181

  Fly   179 DLYTSVGTGMITHLCF-VGYLSIGVLYRDLNNYVDCQLRAQLRSLNGENNSFRNNPQPTRQAISN 242
            .|     |..:..||. :|:..:.||.    |:....:...:.:|:|         :..|:....
  Fly   182 RL-----THFLHFLCVKMGFFGVLVLL----NHQFLVIHLAINALHG---------RKARKKWKA 228

  Fly   243 LDKCLYLYDEIHQVSRSFQQLFDL---PLFLSLAQSLLAMSMVSYHAILRRQYS----------- 293
            |.....::.:..:::|....:||:   .:|:::..:.:   .:.|||:   |||           
  Fly   229 LRSVAAMHLKTLRLARRIFDMFDIANATVFINMFMTAI---NILYHAV---QYSNSSIKSNGWGI 287

  Fly   294 --------FNLWG-LVIKLLIDVVLLTMSVHSAVNGSRLIRRLSFENFYVTD----SQSYHQKLE 345
                    ||.|| :.:..::|.|     |.|..|..:.:|:||       |    .....::|:
  Fly   288 LFGNGLIVFNFWGTMALMEMLDSV-----VTSCNNTGQQLRQLS-------DLPKVGPKMQRELD 340

  Fly   346 LFLGRLQHQELRVFPLGLFEVSNELTLFFLSAMVTYLVFLVQYGMQSQQ 394
            :|..:|:...|.....|:.|:.....|.::.::::.::.|:|:.::.|:
  Fly   341 VFTMQLRQNRLVYKICGIVELDKPACLSYIGSILSNVIILMQFDLRRQR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr93bNP_732664.2 7tm_7 24..391 CDD:285581 76/411 (18%)
Gr58bNP_523808.2 7tm_7 12..385 CDD:285581 82/433 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.