DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr93c and Gr98d

DIOPT Version :9

Sequence 1:NP_732665.1 Gene:Gr93c / 117471 FlyBaseID:FBgn0045469 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_733214.1 Gene:Gr98d / 43309 FlyBaseID:FBgn0046885 Length:412 Species:Drosophila melanogaster


Alignment Length:405 Identity:69/405 - (17%)
Similarity:123/405 - (30%) Gaps:193/405 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 CFRLSASLICGICIIVVQVCY------EKEL----------------------------LRMIIS 118
            |:.:|.||      :|:..||      :|::                            |.::::
  Fly    49 CYLISISL------MVIYECYANIVALQKDIHKFHAEDSSKVMGNTQKVLVVAMFVWNQLNILLN 107

  Fly   119 FLRLFRRVRRLSSLK------RIGFGGKREFFLLLFK---------------------------- 149
            |.||.|....::.|:      ..||.|:|.::...|:                            
  Fly   108 FRRLARIYDDIADLEIDLNNASSGFVGQRHWWRFRFRLALSVGLWIVLLVGLTPRFTLVALGPYL 172

  Fly   150 ------------------------FICLVYEL-----------------------YSEIC----- 162
                                    |:.|:|||                       ..|:|     
  Fly   173 HWTNKVLTEIILIMLQLKCTEYCVFVLLIYELILRGRHILQQISVELEGNQSRDSVQELCVALKR 237

  Fly   163 ------QLWHLPDSLSLF----ATLCEIFLEIGSLMIIHIGFVGYLSVAALYSEVNSFARIELRR 217
                  ::|.|.:.:||:    .||..::.|:..|.|::         .||...||.....:.||
  Fly   238 NQLLAGRIWGLVNEVSLYFTLSLTLLFLYNELTILQIVN---------WALIKSVNPNECCQYRR 293

  Fly   218 QLRSLERPVGGPVGRKQLRIVEYRV-----DECISVYDEIERVGRTFHRLLELPV----LIILLG 273
                        ||...|..:...:     :.||..|:.|.||   .|::..|..    ||:.:|
  Fly   294 ------------VGTCLLLSINIFLSCLYSEFCIQTYNSISRV---LHQMYCLSAAEDYLILKMG 343

  Fly   274 -----------KIFATTILSYEVIIRPELYARKIGMWGLVVKSFADVILLTLAVHEAVSSSRMMR 327
                       |:..|....:::.::        ...|:||..|..:|:|.....:..:.|..| 
  Fly   344 LREYSLQMEHLKLIFTCGGLFDINLK--------FFGGMVVTLFGYIIILVQFKIQFFAQSNFM- 399

  Fly   328 RLSLENFPITDHKAW 342
                :|...|:.||:
  Fly   400 ----QNINSTELKAY 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr93cNP_732665.1 7tm_7 18..393 CDD:285581 69/405 (17%)
Gr98dNP_733214.1 7tm_7 13..392 CDD:285581 63/380 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.