DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr93d and Gr98c

DIOPT Version :9

Sequence 1:NP_732666.1 Gene:Gr93d / 117470 FlyBaseID:FBgn0045468 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:411 Identity:86/411 - (20%)
Similarity:148/411 - (36%) Gaps:126/411 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RSRWKW--------ISVTLRI----------VPLCIYAFTYAEWISNRMLITEKFLHSCSLVVSI 91
            |.|:.|        |::.|.:          :.|.||.| :.|..|..|..|:|||         
  Fly    40 RRRFCWMAGYSLYLIAILLMVFYEFHANIVSLHLEIYKF-HVEDFSKVMGRTQKFL--------- 94

  Fly    92 PCYLSIIHLKICHGPEVTKLVNQYLHIFRLG---------TLDIRRRSQFGGGRE---LFLLILS 144
                 |:.:..|:      .:|..|:..|||         .|.|.:.|:...|:.   .|.|.|:
  Fly    95 -----IVAIATCN------QLNILLNYGRLGLIYDEIANLDLGIDKSSKNFCGKSHWWSFRLRLT 148

  Fly   145 VCCQIHEYVFILVIASRLCG----FQHIIWWVSYTYVFIICNSIMCFG--------FIWHLSLGV 197
            :...:...:.|.||.....|    |.|   ||:.....||...:...|        .::.|.|..
  Fly   149 LSIGLWMVIIIGVIPRLTLGRAGPFFH---WVNQVLTQIILIMLQLKGPEYCLFVLLVYELILRT 210

  Fly   198 LYA--ELNDNLR-FESGFQTAFL---RKQQRIRVQKSMALFKEISSVVTSLQDIFNVHLFLSALL 256
            .:.  :|.|:|. |:.|.:...|   .||.::.:.:...|..||.:.......:    |||...|
  Fly   211 RHVLEQLKDDLEDFDCGARIQELCVTLKQNQLLIGRIWRLVDEIGAYFRWSMTL----LFLYNGL 271

  Fly   257 TLLQVLVVW------------------------YKMIIDLGFSDFRIWSFSLKNLIQTLLPVLAI 297
            |:|.| |.|                        :.:::...||:..:.::   |.|..:|..:..
  Fly   272 TILHV-VNWAIIRSIDPNDCCQLNRLGSITFLSFNLLLTCFFSECCVKTY---NSISYILHQIGC 332

  Fly   298 QEAANQFKQTRERALDIFLVGKSKHWMKSVEIFVTHLNLSEFRVNLLGLFNVSNELFLIIVSAMF 362
            ...|.:|:..             |..:|...:.:.||.|. |...  |||:::.:||..::..:.
  Fly   333 LPTAEEFQML-------------KMGLKEYILQMQHLKLL-FTCG--GLFDINIKLFGGMLVTLC 381

  Fly   363 CYLVFVTQ------CVIVYRR 377
            .|::.:.|      .:|.||:
  Fly   382 GYVIIIVQFKIQDFALIGYRQ 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr93dNP_732666.1 7tm_7 11..375 CDD:285581 84/407 (21%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 83/400 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.