DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl11 and Adgrd1

DIOPT Version :9

Sequence 1:NP_731479.3 Gene:mthl11 / 117467 FlyBaseID:FBgn0045443 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_001070157.3 Gene:Adgrd1 / 689257 RGDID:1594795 Length:903 Species:Rattus norvegicus


Alignment Length:348 Identity:70/348 - (20%)
Similarity:136/348 - (39%) Gaps:75/348 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 MAYGRFECVRKSRLSNASI-----PVKFSSVFFMVITIAAYLWLPKFRSLHGKCCNLYFICLA-- 269
            :.|....|   :.|:|.:|     |:|.:....:.::..:|:.           |:|..:|||  
  Rat   563 LTYSVCHC---THLTNFAILMQVVPLKLTLGHQVALSSISYVG-----------CSLSVLCLAAT 613

  Fly   270 -ITF-LLNVISL-------------FGI------------FELKTPICYLTGYAGYFTVMATFLW 307
             :|| :|:.:|.             |.:            .|..|..|.:.....::..:..|.|
  Rat   614 LVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFSMEPGTVPCQVLAVLLHYFFLTAFAW 678

  Fly   308 LSVISFDVWRRFAMRKFQVFYKNKRSSFFNYNIIVWSSAGLLTCIIFLVDQFVETNLDNPYNPAV 372
            :.|....::...    .:||........:.|. |.| ...||.|||     .|.:::|: |... 
  Rat   679 MLVEGLHLYSMV----IKVFGSEDSKHLYYYG-IGW-GCPLLICII-----SVSSSMDS-YGTG- 730

  Fly   373 GVFSCWIFTNGWSATFYFYAPLAILIILNCASFFLTTRYIYVENKQNQKVLNNSEPQKLSRNHAN 437
              .|||:.... .|.:.|..|..::|::|.......||.|...:..:.|:..:....||:.    
  Rat   731 --DSCWLSVES-GAIWAFVGPALLVIVVNIVILVAVTRVISHISTDSYKIHGDPSAFKLTA---- 788

  Fly   438 YRIYFRLFIIMGGSWFLEIIAFICEMENMWKPLIILNDYINCSQGIIIFV-ATFCNHEMFRLIRK 501
             :....|..|:|.||...::| :.:...:::.:..:   :|.|||:.||: ....|.|:....:.
  Rat   789 -KAVAVLLPILGTSWVFGVLA-VSDRALVFQYMFAI---LNSSQGLFIFLFHCLLNSEVRAAFKH 848

  Fly   502 RIQNRNITSLEL-TNTSRPVESE 523
            :::..::||... |..::|..|:
  Rat   849 KMKVWSLTSSSAHTANTKPSSSD 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl11NP_731479.3 Methuselah_N 26..204 CDD:310923
7tmB3_Methuselah-like 236..504 CDD:320167 58/297 (20%)
TM helix 2 258..280 CDD:320167 9/38 (24%)
TM helix 3 291..318 CDD:320167 3/26 (12%)
TM helix 4 335..355 CDD:320167 8/19 (42%)
TM helix 5 383..412 CDD:320167 7/28 (25%)
TM helix 6 433..460 CDD:320167 6/26 (23%)
TM helix 7 468..493 CDD:320167 6/25 (24%)
Adgrd1XP_001070157.3 LamG <173..273 CDD:304605
GPS 539..579 CDD:280071 4/18 (22%)
7tm_4 595..831 CDD:304433 54/271 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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