DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl11 and adgrd2

DIOPT Version :9

Sequence 1:NP_731479.3 Gene:mthl11 / 117467 FlyBaseID:FBgn0045443 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_021334184.1 Gene:adgrd2 / 571770 ZFINID:ZDB-GENE-081104-190 Length:1145 Species:Danio rerio


Alignment Length:501 Identity:98/501 - (19%)
Similarity:186/501 - (37%) Gaps:114/501 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DG---DRVSVP----KHIRGCVCKLKTCIRFCCHHKKLMAGNLCSQDVYENLT-YEYTLDITQ-L 122
            ||   |.:|||    |.:|....:..|.:.......|      |..:..||:: :....|.:| .
Zfish   635 DGGNRDCISVPAKNMKELRNNDFRKVTVLNTWFSSVK------CLSEKEENISLFPIVTDGSQRF 693

  Fly   123 NGSVIKKHVLNDMVVQQDLPLPCERHYSLD---AETST----------YDMWSLYENGSLFRHFD 174
            .|:|:...|::..|:..:.|:....|::|.   ..||.          :|:.|  :.|..     
Zfish   694 VGTVLGSSVISSTVLADEQPVSVAIHFTLQHRLQNTSVKFIPVCAFWDFDLMS--DGGGW----- 751

  Fly   175 QRYLSKQEFCL----QPNPTST----GKNYSLIVAFNCIQKPSMKMAYGRFECVRKSRLSNASI- 230
                 ..:.|:    |.|.||.    ..|::|::....:|:          :.|..:.|...|: 
Zfish   752 -----STKGCVVISTQNNSTSCYCNHTTNFALLLQIYEVQR----------DAVHDAGLQILSLI 801

  Fly   231 --PVKFSSVFFMVITIAAYLWLPKF--RSLHGKCCNLYFICLAITFLLNVISLFGIFELKTPICY 291
              .|...::.|..|...| :.:||.  .::|.   ||....:...||| ::|.:.....:.  |:
Zfish   802 GSAVSLCALIFTFILFVA-VGVPKSDRTTVHK---NLMAALIVAQFLL-ILSDWAAGSQEA--CW 859

  Fly   292 LTGYAGYFTVMATFLWLSVISFDVWRRFAM------RKFQVFYKNKRSSFFNYNIIVWSSAGLLT 350
            |.....:...:::|.|:.|....:|.:...      |:.:::|           ::.|....::.
Zfish   860 LVTALLHLFFLSSFCWMLVEGLLLWSKVVSVNISEDRRMKMYY-----------VLGWGLPVVIV 913

  Fly   351 CI--IFLVDQFVETNLDNPYNPAVGVFSCWIFTNGWSATFYFYAPLAILIILNCASFFLTTRYIY 413
            .:  :..:||:....            .||:.... |..:.|..|:..::.:|....|.......
Zfish   914 AVTLVATLDQYKAQQ------------HCWLNLQS-SVIWAFAGPVLFVLAVNAVVLFRVVLVTV 965

  Fly   414 VENKQNQKVLNNSEPQK---LSRNHANYRIYFRLFIIMGGSWFLEIIAFICEMENMWKPLIILND 475
            ...::..|:|..|...|   |....|..|....|..::|.:|...::..:.::      :..|..
Zfish   966 SSARRRAKMLTPSSDSKLHTLDLTWAATRPVLILLPVLGLTWLCGVLVHLSDV------MAYLFI 1024

  Fly   476 YINCSQGIIIF-VATFCNHEMFRLIRKRIQNRNITSLELTNTSRPV 520
            .:|..||:.|| |....|.|:...|| |||.:. .:|..||.|:|:
Zfish  1025 TLNAFQGLYIFLVYAVYNSEVRNAIR-RIQEKR-KALSFTNCSQPI 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl11NP_731479.3 Methuselah_N 26..204 CDD:310923 34/166 (20%)
7tmB3_Methuselah-like 236..504 CDD:320167 52/281 (19%)
TM helix 2 258..280 CDD:320167 6/21 (29%)
TM helix 3 291..318 CDD:320167 5/26 (19%)
TM helix 4 335..355 CDD:320167 1/21 (5%)
TM helix 5 383..412 CDD:320167 5/28 (18%)
TM helix 6 433..460 CDD:320167 5/26 (19%)
TM helix 7 468..493 CDD:320167 7/25 (28%)
adgrd2XP_021334184.1 LamG 204..402 CDD:328935
GPS 735..779 CDD:307782 9/55 (16%)
7tmB2_GPR144 792..1054 CDD:320383 56/299 (19%)
TM helix 1 794..819 CDD:320383 5/24 (21%)
TM helix 2 828..850 CDD:320383 7/25 (28%)
TM helix 3 859..886 CDD:320383 5/26 (19%)
TM helix 4 898..918 CDD:320383 2/30 (7%)
TM helix 5 935..964 CDD:320383 5/29 (17%)
TM helix 6 988..1015 CDD:320383 5/26 (19%)
TM helix 7 1017..1042 CDD:320383 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.