DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl11 and Adgrg3

DIOPT Version :9

Sequence 1:NP_731479.3 Gene:mthl11 / 117467 FlyBaseID:FBgn0045443 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_766624.3 Gene:Adgrg3 / 54672 MGIID:1859670 Length:542 Species:Mus musculus


Alignment Length:467 Identity:87/467 - (18%)
Similarity:163/467 - (34%) Gaps:124/467 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 DYDGDRVSVPKHIRGCVCKLKTCIRFCCHHKKLMAGNLCSQDVYENLTYEYTLDITQLNGSVIKK 129
            |...|.|.:||.:.|.:...::.:|.......:.|||:          ::....:.....||:..
Mouse   123 DEPADGVRLPKSLFGALPGNRSAVRLAITVLDIGAGNV----------FKGPKLLEDKGSSVLNN 177

  Fly   130 HVLNDMVVQQ---DLPLPCERHYSLDAETS----TYDMWSLYENGSLFRHFDQRYLSKQEFCLQP 187
            .::...|.|.   .|..|.|..:|.:.:..    |...|.:.:.     .:|....|     ..|
Mouse   178 RMVGLSVGQMHATGLSEPVEITFSHERQPPNVILTCVFWDMAKG-----DWDSHGCS-----TVP 232

  Fly   188 NPTSTGKNYSLIVAFNCIQKPSMKMAYGRFECVRKSRLSNASIPVKFSSVFFMVITIAAYL---- 248
            ....|......:..|..:.:|.:.:|..:    ..:|:|.|...|   |:.|:..|:..|:    
Mouse   233 GDGRTVCRCDHLTFFALLLRPILDLATAQ----TLTRISQAGSAV---SMIFLAFTMVLYVAFRF 290

  Fly   249 WLPKFRS-----LHGKCCNLYFICLAITFLLNVISLFGIFELKTPI-CYLTGYAGYFTVMATFLW 307
            .|.:|:|     :| ...::....|.:|||:||    |......|. |::.....::.::..|.|
Mouse   291 SLQRFKSEDAPKIH-MALSISLFLLNLTFLINV----GSSSQGPPASCWVRAAIFHYFLLCVFTW 350

  Fly   308 LSVISFDVWRRFAMRKFQVFYKNKRSSFFNYNIIVWSSAGLLTCIIFLVDQFVETNLDNPYNPAV 372
            :.:.:|.:: ..|:|.|..::.:   .|...:::.|   ||...::      :.....|.|    
Mouse   351 MGLEAFHLY-LLAIRVFNTYFGH---YFLKLSLLAW---GLPVLVV------IGAGSSNSY---- 398

  Fly   373 GVFS------------CWI--------FTNGW-SATFYFYAPLAILIILNCASFFLTTRYIYVEN 416
            ||::            ||.        ..:|: ..||.|.|.:..|:    |....|...:....
Mouse   399 GVYTIRDQENRTSLELCWFQKEPALYATVHGYFLVTFLFGAVVLALV----AWKIFTLPSVTAGK 459

  Fly   417 KQN---QKVLNNSEPQKLSRNHANYRIYFRLFIIMGGSWFLEIIAFICEMENMWKPLIILNDYI- 477
            .|.   :.||.                ...|..::|.:|.|.::.          ||.:...|: 
Mouse   460 GQGPTWKSVLT----------------VLGLSSLVGMTWGLAVLT----------PLGLSTIYVF 498

  Fly   478 ---NCSQGIIIF 486
               |..||:.||
Mouse   499 TLLNSLQGLFIF 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl11NP_731479.3 Methuselah_N 26..204 CDD:310923 25/145 (17%)
7tmB3_Methuselah-like 236..504 CDD:320167 56/289 (19%)
TM helix 2 258..280 CDD:320167 6/21 (29%)
TM helix 3 291..318 CDD:320167 3/26 (12%)
TM helix 4 335..355 CDD:320167 4/19 (21%)
TM helix 5 383..412 CDD:320167 8/29 (28%)
TM helix 6 433..460 CDD:320167 4/26 (15%)
TM helix 7 468..493 CDD:320167 8/23 (35%)
Adgrg3NP_766624.3 GPS 211..250 CDD:280071 7/48 (15%)
7tm_4 262..509 CDD:304433 58/301 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.