DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl11 and Adgre1

DIOPT Version :9

Sequence 1:NP_731479.3 Gene:mthl11 / 117467 FlyBaseID:FBgn0045443 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001007558.1 Gene:Adgre1 / 316137 RGDID:1359214 Length:932 Species:Rattus norvegicus


Alignment Length:308 Identity:71/308 - (23%)
Similarity:122/308 - (39%) Gaps:85/308 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 CVRKSRL----SNASIPVKFS-----------SVFFMVITIAAYLWLPKFRSL--HGKCCNLYF- 265
            |.|.:.|    ::..:.::||           |:..:.:.||.:|   .||::  |....:|:. 
  Rat   627 CNRMTNLAIIMASGELTMEFSLYIISYVGTVISLVCLALAIATFL---LFRAVQNHNTYLHLHLC 688

  Fly   266 ICLAITFLLNVISLFGI--FELKTPICYLTGYAGYFTVMATFLW---------LSVISFDVWRRF 319
            :||   ||..::.|.||  .:.:|....:.|:..|. .:|.|.|         |.|.:..|...|
  Rat   689 VCL---FLAKILFLTGIDKTDNQTACAIIAGFLHYL-FLACFFWMLVEAVMLFLMVRNLKVVNYF 749

  Fly   320 AMRKFQVFYKNKRSSFFNYNIIVWSSAGLLTCIIFLVDQFVETNLDNPYNPAVGVFS-CWIFTNG 383
            :.|..::.:    ...|.|.:.|         ::.::...|     :|:  ..|:.: ||:.|..
  Rat   750 SSRNIKMLH----LCAFGYGLPV---------VVVIISATV-----HPW--GYGMHNRCWLNTET 794

  Fly   384 ---WSATFYFYAPLAILIILNCASFFLTTRYIYVENKQNQKVLN-NSEPQKLSRNH-ANYRIYFR 443
               ||    |..|:.::|.:|.|....|...:      .||:.: |||..||.... ..::...:
  Rat   795 GFIWS----FLGPVCMIITINSALLAWTLWVL------RQKLCSVNSEVSKLKDTRLLTFKAIAQ 849

  Fly   444 LFIIMGGSWFLEIIAFICEMENMWKPLIILNDY----INCSQGIIIFV 487
            :| |:|.||.|.|...        .||..:..|    ||..||..||:
  Rat   850 IF-ILGCSWVLGIFQI--------GPLASIMAYLFTTINSLQGAFIFL 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl11NP_731479.3 Methuselah_N 26..204 CDD:310923
7tmB3_Methuselah-like 236..504 CDD:320167 66/276 (24%)
TM helix 2 258..280 CDD:320167 5/22 (23%)
TM helix 3 291..318 CDD:320167 8/35 (23%)
TM helix 4 335..355 CDD:320167 3/19 (16%)
TM helix 5 383..412 CDD:320167 8/31 (26%)
TM helix 6 433..460 CDD:320167 7/27 (26%)
TM helix 7 468..493 CDD:320167 9/24 (38%)
Adgre1NP_001007558.1 EGF_CA 33..63 CDD:238011
EGF_CA 81..>109 CDD:214542
EGF_CA 133..172 CDD:214542
EGF_CA 173..>203 CDD:214542
EGF_CA 222..255 CDD:214542
cEGF 245..275 CDD:289433
EGF_CA 272..>301 CDD:214542
EGF_CA 319..359 CDD:284955
Cell attachment site. /evidence=ECO:0000255 507..509
GPS 592..641 CDD:197639 3/13 (23%)
7tm_2 646..886 CDD:278432 66/285 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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