DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl11 and lat-1

DIOPT Version :9

Sequence 1:NP_731479.3 Gene:mthl11 / 117467 FlyBaseID:FBgn0045443 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001366731.1 Gene:lat-1 / 174419 WormBaseID:WBGene00002251 Length:1014 Species:Caenorhabditis elegans


Alignment Length:416 Identity:77/416 - (18%)
Similarity:137/416 - (32%) Gaps:147/416 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 SLYENGS-------------LFRHFDQ--RYLSKQEFCLQPNPTSTGKNYSLIVAFNCIQKPS-M 210
            ||.|||.             .|.|.:.  |:||        |||....|:..:.     .||| .
 Worm   461 SLIENGKERRVENLTQPVRITFYHKESSVRHLS--------NPTCVWWNHHELK-----WKPSGC 512

  Fly   211 KMAYGR-----FECVRKSRLSNASIPV-----KFSSVFFMVITIAAYLWLPKFRSLHGKCCNLYF 265
            |::|..     .:|   :.|::.::.:     ..:.:...::|:..|:.           |.:..
 Worm   513 KLSYHNKTMTSCDC---THLTHFAVLMDVRGHDLNEIDQTLLTLLTYVG-----------CIISI 563

  Fly   266 ICLAITFLL----------------NVISLFGIFELKTPICYLTG--------YAGYFTVMATFL 306
            |||.:||..                |:.....|.|    |.:|.|        ..|...|...::
 Worm   564 ICLLLTFFAYLIFSRNGGDRVFIHENLCLSLAIAE----ITFLAGITRTEDSLQCGIIAVALMYM 624

  Fly   307 WLSVISFDVWRRFAMRKF--QVFYKNKRSSFFNYNIIVWSSAGLLTCIIFLVDQFVETNLDNPYN 369
            :||.:::.:...:.:.:.  :||..:.|.  |.|.::.:....::|.:.:|.      |.|....
 Worm   625 FLSALTWMLLEGYHIHRMLTEVFPSDPRR--FTYLLVGYIPPAIITLVAYLY------NSDGFGT 681

  Fly   370 PAVGVFSCWIFTNG---W----SATFYFYAPLAILIILNCASF------FLTTRYIYVENKQNQK 421
            |.    .||:.|..   |    .|.|.|.|...:|:...|..:      :|..|:.....:..:.
 Worm   682 PD----HCWLSTQNNFIWFFAGPACFIFCANSLVLVKTLCTVYQHTSGGYLPCRHDVDSGRSIRN 742

  Fly   422 VLNNSEPQKLSRNHANYRIYFRLFIIMGGSWFLEIIAFICEMENMW--KPLIILNDYI----NCS 480
            .:..|               ..|..::|.:|...:         .|  ....|:..|:    |..
 Worm   743 WVKGS---------------LALASLLGVTWIFGL---------FWVEDSRSIVMAYVFTISNSL 783

  Fly   481 QGIIIFV--ATFC-------NHEMFR 497
            ||:.||:  ..|.       .|.|:|
 Worm   784 QGLFIFLFHVVFAEKMRKDVGHWMYR 809

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
mthl11NP_731479.3 Methuselah_N 26..204 CDD:310923 14/56 (25%)
7tmB3_Methuselah-like 236..504 CDD:320167 56/316 (18%)
TM helix 2 258..280 CDD:320167 7/37 (19%)
TM helix 3 291..318 CDD:320167 6/34 (18%)
TM helix 4 335..355 CDD:320167 3/19 (16%)
TM helix 5 383..412 CDD:320167 9/41 (22%)
TM helix 6 433..460 CDD:320167 3/26 (12%)
TM helix 7 468..493 CDD:320167 8/37 (22%)
lat-1NP_001366731.1 Gal_Lectin 51..133 CDD:396628
HormR 180..244 CDD:214468