DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl11 and adgrl2b.1

DIOPT Version :9

Sequence 1:NP_731479.3 Gene:mthl11 / 117467 FlyBaseID:FBgn0045443 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001353776.1 Gene:adgrl2b.1 / 110437953 ZFINID:ZDB-GENE-130116-4 Length:1454 Species:Danio rerio


Alignment Length:297 Identity:62/297 - (20%)
Similarity:113/297 - (38%) Gaps:71/297 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 LSNASIPVKFSSVFFMVITIAAYLWLPKFRSLHGK--CCNLYFICLAITFLLNVISLFGIFELKT 287
            ::...|.|....:...:.|...:..|...|:...|  |.||        |:..::.|.||...:.
Zfish   837 ITRLGIAVSLVCLAISIFTFCFFRGLQSDRNTIHKNLCINL--------FIAELLFLVGINMTEP 893

  Fly   288 PI-CYLTGYAGYFTVMATFLWLSVISFDVWRRFAMRKFQVFYKNKRSSFFNYNIIVWSSAGLLTC 351
            || |.:.....:|..:|.|.|:.:....::    :...:||     .|.|:.....::|..|..|
Zfish   894 PIVCSVIAGVLHFFFLAAFSWMCLEGVQLF----LMLVEVF-----ESEFSRRKYYYASGYLFPC 949

  Fly   352 IIFLVDQFVETNLDNPYNPAVGVFSCWIFTNG---WSATFYFYAPLAILIILNCASFFLTTRYIY 413
            ::..:...::      |.......:||:..:.   ||    |..|:..:|:||.. |.:.|.|..
Zfish   950 VVVGISAAID------YKSYGTKKACWLRVDNHFIWS----FIGPVTFIILLNLI-FLVVTMYKM 1003

  Fly   414 VENKQNQKVLNNSEPQKLSRNHANYRIYFRLFIIMGGSWFLEIIAFICEMENMWK-PLIILND-- 475
            |::..:.|. ::|..:.:.                  ||.....|.:|.:...|. .|:.|||  
Zfish  1004 VKHSMSMKP-DSSRLESIR------------------SWVFGAFALLCLLCLTWSFGLLFLNDSS 1049

  Fly   476 ----YI----NCSQGIIIFVATFCNHEMFRLIRKRIQ 504
                |:    |..||:.||| ..|      |::|:::
Zfish  1050 VIMAYLFSIFNTLQGMFIFV-FHC------LLQKKVR 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl11NP_731479.3 Methuselah_N 26..204 CDD:310923
7tmB3_Methuselah-like 236..504 CDD:320167 60/284 (21%)
TM helix 2 258..280 CDD:320167 5/23 (22%)
TM helix 3 291..318 CDD:320167 4/26 (15%)
TM helix 4 335..355 CDD:320167 4/19 (21%)
TM helix 5 383..412 CDD:320167 9/31 (29%)
TM helix 6 433..460 CDD:320167 3/26 (12%)
TM helix 7 468..493 CDD:320167 12/35 (34%)
adgrl2b.1NP_001353776.1 Gal_Lectin 50..130 CDD:307994
OLF 139..395 CDD:321983
HormR 468..528 CDD:214468
GAIN 538..746 CDD:318649
GPS 770..822 CDD:197639
7tm_GPCRs 831..1088 CDD:333717 62/297 (21%)
TM helix 1 834..858 CDD:320672 3/20 (15%)
TM helix 2 867..888 CDD:320672 6/28 (21%)
TM helix 3 898..920 CDD:320672 4/21 (19%)
TM helix 4 939..955 CDD:320672 3/15 (20%)
TM helix 5 974..997 CDD:320672 8/27 (30%)
TM helix 6 1021..1046 CDD:320672 6/42 (14%)
TM helix 7 1050..1075 CDD:320672 9/31 (29%)
Latrophilin 1087..1454 CDD:308136
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.