DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irbp and KU70

DIOPT Version :9

Sequence 1:NP_536773.1 Gene:Irbp / 117419 FlyBaseID:FBgn0011774 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_564012.1 Gene:KU70 / 838268 AraportID:AT1G16970 Length:621 Species:Arabidopsis thaliana


Alignment Length:671 Identity:148/671 - (22%)
Similarity:275/671 - (40%) Gaps:108/671 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ENDVDLLSGSEDEE---DVSMKRDYHGREAILFVVDAN----LQTAGVE-------RLLEALNII 57
            |.|.|.:...|||:   |...::: ..:|.:::::||:    ..|...|       ....|::.|
plant     2 ELDPDDVFRDEDEDPENDFFQEKE-ASKEFVVYLIDASPKMFCSTCPSEEEDKQESHFHIAVSCI 65

  Fly    58 RTAFISGLLVNDKDLIGLIFANTKHSPPPLEASALDNIVMPDNCAVFLPLRQLTK--PIVEHYLE 120
            ..:..:.::....|.|.:.|.||:......:.:.:....:|:..::..|..:|.|  .::|...:
plant    66 AQSLKAHIINRSNDEIAICFFNTREKKNLQDLNGVYVFNVPERDSIDRPTARLIKEFDLIEESFD 130

  Fly   121 FMGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNAKIAYVTDVREPHPS-----N 180
            ...|.:|      |:............:.:...:|.|...|..:.::...|:..:|..|     .
plant   131 KEIGSQT------GIVSDSRENSLYSALWVAQALLRKGSLKTADKRMFLFTNEDDPFGSMRISVK 189

  Fly   181 SNHFQAALQKASDLEGKEFEFHVIPMVD---DFDYEPFYKEFITLSRAIELDAFQVPDAQMLREI 242
            .:..:..||:|.|.:.......::|:..   .|:...|||:.|.|: :.||..| :|......|.
plant   190 EDMTRTTLQRAKDAQDLGISIELLPLSQPDKQFNITLFYKDLIGLN-SDELTEF-MPSVGQKLED 252

  Fly   243 LSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRTKRVITVQK 307
            :.|:..|:...:|.....:|.:...||:.:..|... |.|.|..:..|  |::   |...:.|::
plant   253 MKDQLKKRVLAKRIAKRITFVICDGLSIELNGYALL-RPAIPGSITWL--DST---TNLPVKVER 311

  Fly   308 Q---KDDGS--QD-IEHEYQIKVTGGWYTCNVGERDLRISMDQLNRVRNLHKPQMMLLGFKHRSS 366
            .   .|.|:  || |:.....|           .:::..::::|::|:.:....:.|||||..|.
plant   312 SYICTDTGAIMQDPIQRIQPYK-----------NQNIMFTVEELSQVKRISTGHLRLLGFKPLSC 365

  Fly   367 LPEVSYIKPANFMYPDDQSIIGSKRLFRALWERCLVRDKIAICLFMCKRKSIPRYVALV---PVE 428
            |.:...:||:.|:||.|:.:|||.|.|.||....:..::.|:..:  ...:.||.||||   .:|
plant   366 LKDYHNLKPSTFLYPSDKEVIGSTRAFIALHRSMIQLERFAVAFY--GGTTPPRLVALVAQDEIE 428

  Fly   429 APDNGEDKNYRSLLCGDGFKIVYLPEAKHIRHLDLQDWNNTENT----ADEQKVEFFQKIIKKLR 489
            : |.|:.:       ..|..::|||.|..||  |:.:.::....    |.:.:::....::::|.
plant   429 S-DGGQVE-------PPGINMIYLPYANDIR--DIDELHSKPGVAAPRASDDQLKKASALMRRLE 483

  Fly   490 V-DYQPNLINDPSLDALQANLLALSLDFSTDTKGLDNLLDTSQQDKR------IEKLL------- 540
            : |:......:|:|....|.|.|::||.:...:..|..|...:...|      ||:..       
plant   484 LKDFSVCQFANPALQRHYAILQAIALDENELRETRDETLPDEEGMNRPAVVKAIEQFKQSIYGDD 548

  Fly   541 PDYEMFAPEAEPHKKRAAKSTTAGASGPKMAKIDDDQLKEFEFVKSLNKDEALTSCTAAQLHFIL 605
            ||.|..:...|..|||.|.....|       |.|..:|.:...:|.|...|..|..||..|..  
plant   549 PDEESDSGAKEKSKKRKAGDADDG-------KYDYIELAKTGKLKDLTVVELKTYLTANNLLV-- 604

  Fly   606 QHHFDVTMPKSSKKAKLVAKI 626
                      |.||..|:.:|
plant   605 ----------SGKKEVLINRI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrbpNP_536773.1 Ku_N 33..256 CDD:367627 43/243 (18%)
KU70 255..546 CDD:238407 76/317 (24%)
HeH 593..624 CDD:338564 8/30 (27%)
KU70NP_564012.1 ku70 24..619 CDD:273151 141/649 (22%)
KU70 265..544 CDD:238407 73/307 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3688
eggNOG 1 0.900 - - E1_KOG2327
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37483
Inparanoid 1 1.050 82 1.000 Inparanoid score I2360
OMA 1 1.010 - - QHG55383
OrthoDB 1 1.010 - - D402798at2759
OrthoFinder 1 1.000 - - FOG0005016
OrthoInspector 1 1.000 - - oto3639
orthoMCL 1 0.900 - - OOG6_102426
Panther 1 1.100 - - LDO PTHR12604
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

Return to query results.
Submit another query.