DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irbp and xrcc6

DIOPT Version :10

Sequence 1:NP_536773.1 Gene:Irbp / 117419 FlyBaseID:FBgn0011774 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_956198.2 Gene:xrcc6 / 334488 ZFINID:ZDB-GENE-030131-6420 Length:610 Species:Danio rerio


Alignment Length:622 Identity:155/622 - (24%)
Similarity:279/622 - (44%) Gaps:100/622 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTWN----PENDVDLLSGSEDEEDVSMKRDYHGREAILFVVDA---------NLQTAGVERLLE 52
            |:.|.    .|:|||    .:|||:........||::::|:|||         |.:.:..:..::
Zfish     1 MANWGNYFPNEDDVD----EQDEEESGGDYKSSGRDSLVFLVDASKEMFIKGENGEPSNFDMTMQ 61

  Fly    53 ALNIIRTAFISGLLVNDKDLIGLIFANTKHSPPPLEASALDNIVMPDNCAVFLPLRQLTKPI-VE 116
            .   :|:.:.|.::.:|:||:.|:|..|:.|..|                     |...|.: |.
Zfish    62 C---VRSVYTSKIISSDRDLVALVFYGTEQSKNP---------------------RNSFKHVYVY 102

  Fly   117 HYLEFMGGVETQFAD-VYG-----LAEPD-GRGRFDL--MIRLCIEMLEKCGKKLNNAKIAYVTD 172
            |.||..|....|..| :.|     .||.. |.|...|  .:..|..:......:|::.::...|.
Zfish   103 HDLESPGAKRVQDIDKLKGDKGGQFAEKTMGSGETSLGEALWCCSNLYSDIKLRLSHKRLMIFTC 167

  Fly   173 VREPHPSNSNHFQAALQKASDLE--GKEFEFHVIPMVDDFDYEPFYKEFITLSRAIELDAFQVPD 235
            ..|||..:|...:.|..||:||:  |...:...:.....||...|:.:.::..........|:..
Zfish   168 RDEPHGGDSAKDRQARTKAADLKETGVAIDLMHLSKPGGFDVSLFFCDIVSPPEDESDLGLQIEP 232

  Fly   236 AQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRTK 300
            .:.| |.|..|...::..:|.....:|.||..:.::|..|...:....|..|::.|.:|..||||
Zfish   233 CRKL-EDLQKRVRAKELKKRAQCRLTFSLGEGVDLAVGVYVLARTAMKPSAVKLYRDNNEPVRTK 296

  Fly   301 -RVITVQKQKDDGSQDIEHEYQIKVTGGWYTCN-------VGERDLRISMDQLNRVRNLHKPQMM 357
             |:...|                  |||....|       .|::.:.:..|:::.::....|.::
Zfish   297 SRLFHTQ------------------TGGILLPNDTKRAQVYGQKQIVMEKDEVDEIKKFDDPGLV 343

  Fly   358 LLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERCLVRDKIAICLFMCKRKSIPRYV 422
            |:|||....|....:::||.|:||:::.|.||..:|.||..:|..::..|:|.::.:|.:.||:|
Zfish   344 LIGFKPIDRLKLHHHLRPALFIYPEEEQISGSSCMFTALLLKCCEKNVFALCKYIPRRNTPPRFV 408

  Fly   423 ALVPV-EAPDNGEDKNYRSLLCGDGFKIVYLPEAKHIRHLDLQDWNNTENTADEQKVEFFQKIIK 486
            ||||. |..|..:.:     ....||.::|||.|..||.:|    .:...||.:::|:..::|:.
Zfish   409 ALVPQREELDQSQTQ-----ATPPGFHVIYLPFADDIRTVD----PHVGPTASDEQVDKMKEIVH 464

  Fly   487 KLRVDYQPNLINDPSLDALQANLLALSLDFSTDTKGLDNLL--DTSQQDKRIEKLLPDYE--MFA 547
            |||..|:.:...:|.|....:||.||:||. ...:.:::|.  .....|.|:..|:.:::  ::.
Zfish   465 KLRFKYRSDAFENPVLQQHYSNLEALALDM-LSPEPIEDLTMPKVKMMDDRLGPLVQEFKDLVYP 528

  Fly   548 PEAEPHKKRAAK---STTAGASGPKMAKID--DDQLK 579
            |:..|..|.|||   :.:.|.:..|.||::  :::||
Zfish   529 PDYNPEGKPAAKRKPAESGGGAAEKKAKVEISEEELK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrbpNP_536773.1 Ku_N 33..256 CDD:427470 51/243 (21%)
KU70 255..546 CDD:238407 81/303 (27%)
HeH 593..624 CDD:403988
xrcc6NP_956198.2 ku70 22..609 CDD:273151 146/597 (24%)
Blue background indicates that the domain is not in the aligned region.

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