DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tspan11

DIOPT Version :10

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:269 Identity:63/269 - (23%)
Similarity:112/269 - (41%) Gaps:53/269 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KFVLNLCNFLFLICGLLLVVSGLYIFSDNK---RILLSRLLAASSDRLSSLPQPLLFYIALGVAI 69
            |::|.:.||.|.:.|..::..|::...:..   .||.|...|||:        .:|.::...|..
Mouse    17 KYLLFIFNFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAASA--------YILIFVGGLVMT 73

  Fly    70 AGFVATLAAVVGFWASCLHTY-CFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQ--MV 131
            .||:. ..|::....|||.|| |.|.:.||..:|..:...|....::          ||.:  :.
Mouse    74 TGFLG-FGAIIREQKSCLSTYFCLLLVIFLVELVAGVLAHVYYQRLS----------DELKWHLN 127

  Fly   132 RSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRL--QGYGQRNWPVPLSCC--FL 192
            .:|..:||.|...:.|.::|..|..|.|||..||.|:..|.:.|  :..|::   ||.|||  .:
Mouse   128 STLTEHYGQPRAAEITASVDRLQQDFKCCGSNSSADWQHSAYILSQEALGRQ---VPDSCCKTVV 189

  Fly   193 KNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYSIFLGASLILAMIEFC 257
            ...|..     ..|:|          .|:.|   ..|:..|:.:..:...:.....:.:|.::.|
Mouse   190 ARCGQR-----AHPSN----------IYKVE---GGCMAKLEQFVADHLLLMGAVGIGVACLQIC 236

  Fly   258 VLLAIIMSC 266
               .::::|
Mouse   237 ---GMVLTC 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 40/158 (25%)
tetraspanin_LEL 117..241 CDD:239401 31/129 (24%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 63/269 (23%)
CD151_like_LEL 112..220 CDD:239408 32/138 (23%)

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