DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tspan2

DIOPT Version :10

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_072111.1 Gene:Tspan2 / 64521 RGDID:620982 Length:221 Species:Rattus norvegicus


Alignment Length:173 Identity:40/173 - (23%)
Similarity:64/173 - (36%) Gaps:42/173 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGVAIAGF 72
            |::|...|.||.:.|..::..||:.          |......|..|....|..||:.|.|.:.  
  Rat    12 KYLLLGFNLLFWLAGSAVIAFGLWF----------RFGGTIKDLSSEEKSPEYFYVGLYVLVG-- 64

  Fly    73 VATLAAVVGFWASC---LHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGI--SLDETQMVR 132
            ...|...|||:..|   ..:.|.|..:|..::|:...|      :|     .|:  .:.:...:|
  Rat    65 AGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAE------VT-----TGVFAFIGKDVAIR 118

  Fly   133 SLQSNYGVPGQEQFTN----------ALDLAQVRFGCCGMRSS 165
            .:||.|    :|.:::          .|......|.|||..||
  Rat   119 HVQSMY----EEAYSDYVRDRGRGNGTLITFHSAFQCCGKESS 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 36/167 (22%)
tetraspanin_LEL 117..241 CDD:239401 13/61 (21%)
Tspan2NP_072111.1 Tetraspanin 11..212 CDD:459767 40/173 (23%)

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