DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tsp96F

DIOPT Version :9

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001262976.1 Gene:Tsp96F / 43127 FlyBaseID:FBgn0027865 Length:284 Species:Drosophila melanogaster


Alignment Length:298 Identity:71/298 - (23%)
Similarity:117/298 - (39%) Gaps:67/298 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CCFNYKFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFY-IALG 66
            ||...|:::.|.|.||.:.||.:||:.:::.:|...:|             |:.|....| |||.
  Fly     6 CCSCVKYLMVLINILFWLIGLTIVVTSVWMLTDPTFML-------------SMTQNYNHYHIALY 57

  Fly    67 VAIA-GFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQM 130
            |.:| |.:.||.|..|....|..:.|.|..:|..::::::.:    :|...|.......||:  :
  Fly    58 VFLAIGILITLGAFFGCCGVCRESQCLLVSFFCVILIVMVAQ----IAAGAWAFHNKDKLDD--I 116

  Fly   131 VR-----SLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRN-------- 182
            ||     |:|..||.......|...|..|....|||.....|:.||  |.....:.|        
  Fly   117 VRAAVKSSVQEEYGQSTMSSRTVTFDTLQKNLKCCGADGPGDWATS--RFNNVDRTNIVEIAVSS 179

  Fly   183 ----WPVPLSCCFLKNAGHSMAYLDPKPANESMCQSLERLSY----ERERHTESCLPHL-----D 234
                :.:|.|||           .|....||  |:...||.:    ....:.:.|:..|     :
  Fly   180 MNVFYNIPESCC-----------KDNLKDNE--CELSRRLKFGGPLNNAIYQQGCVDKLIEIIYE 231

  Fly   235 NWYREQYSIFLGASLILAMIEFCVLLAIIMSCTGLASQ 272
            ||    .:||...:.:: ::|...|...:..|..:.:|
  Fly   232 NW----VTIFAVTAAVI-LLELLSLTFALSLCCAVRNQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 67/286 (23%)
tetraspanin_LEL 117..241 CDD:239401 34/149 (23%)
Tsp96FNP_001262976.1 Tetraspannin 9..261 CDD:278750 68/290 (23%)
CD151_like_LEL 107..233 CDD:239408 31/142 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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