DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and cd81

DIOPT Version :10

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:278 Identity:56/278 - (20%)
Similarity:107/278 - (38%) Gaps:63/278 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CCFNYKFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGV 67
            |....|::|.:.||:|.:.|.:::...|::..|.:   .|.||   ..:......|..|||.:.:
 Frog     6 CTKCIKYLLFVFNFIFWLAGGVILGVALWLRHDPQ---TSNLL---FQQFEDKHAPGTFYIGVYI 64

  Fly    68 AIA-GFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQMV 131
            .|| |.|......:|.:.:...:.|.|..:|..:|:|...|    :|..:|..     ::..|:.
 Frog    65 IIAVGAVMMFVGFLGCYGAIQESQCLLGTFFACLVILFACE----VAAGIWGF-----VNRDQVS 120

  Fly   132 RSLQSNYGVPGQ-------EQFTNALDLAQV---RFGCCGMRSSLDYDTSLWRLQGYGQRNWPVP 186
            :.::..|....|       ||...||.:.:.   ...|||..|...|.|.               
 Frog   121 KEMRLFYSEVYQHATTGTKEQQQKALPVLKAFHETLQCCGDASLKKYVTM--------------- 170

  Fly   187 LSCCFLKNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYSIFLGASLIL 251
                       |:..:.||.:|     .||:::      .|.|...:|..:..:..:...|::::
 Frog   171 -----------SITDMCPKRSN-----ILEQIT------IEDCHQKIDVLFSTKLYLVGIAAVVV 213

  Fly   252 AMIEFCVLLAIIMSCTGL 269
            |:|....::..::.|.|:
 Frog   214 AVIMIIEMIFSMVLCCGI 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 36/163 (22%)
tetraspanin_LEL 117..241 CDD:239401 23/133 (17%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 53/270 (20%)

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