DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and zgc:64051

DIOPT Version :10

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_956665.1 Gene:zgc:64051 / 393342 ZFINID:ZDB-GENE-040426-1349 Length:221 Species:Danio rerio


Alignment Length:212 Identity:55/212 - (25%)
Similarity:89/212 - (41%) Gaps:43/212 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MACCFNYKFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIAL 65
            |:|....|:::.:.||:|.|||..:...|:|:.              :..|||.||......||.
Zfish     1 MSCLKCLKYIMCVVNFIFFICGAAIFGMGIYLM--------------TFSRLSLLPSLQAMSIAN 51

  Fly    66 GVAIAGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTE-SVLCLAITLWPHCLGISLDETQ 129
            .:.|.|.:.|..:.:||..:.....|.|..:|:.:.:|:|.| :..||.:...........|:  
Zfish    52 TLFITGIIITCVSFLGFLGALKENRCLLISFFILLFILMLAELAAACLMLMYESKIENFIKDD-- 114

  Fly   130 MVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWPVPLSC----- 189
            :|..|..:.....|...|:..|..|..|||||::::.|:       ||:      ||.||     
Zfish   115 LVDGLNQSIKNRKQHNTTDDWDKVQETFGCCGIQNATDW-------QGF------VPQSCNISGT 166

  Fly   190 ------CF--LKNAGHS 198
                  ||  |:|:..|
Zfish   167 SNWHKGCFKLLENSFES 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 39/153 (25%)
tetraspanin_LEL 117..241 CDD:239401 24/95 (25%)
zgc:64051NP_956665.1 Tetraspanin 7..211 CDD:459767 53/206 (26%)
CD53_like_LEL 101..189 CDD:239417 24/98 (24%)

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