DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tsp47F

DIOPT Version :10

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:275 Identity:60/275 - (21%)
Similarity:118/275 - (42%) Gaps:52/275 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KFVLNLCNFLFLICGLLLVVSGLYIFSD-NK--RILLSRLLAASSDRLSSLPQPLLFYIALGVAI 69
            |:||...|.||.|.||.::::|..:.:| |:  ..:..|:||          .|::      :.:
  Fly    10 KYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLA----------PPIV------LIV 58

  Fly    70 AGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQMVRSL 134
            .|.:..|.|.:|.:.:...:...|..:.:.:.|:.:.|..:.:|.:::...|     |..:..||
  Fly    59 TGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDL-----EGMVKNSL 118

  Fly   135 QSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWPVPLSCCFLKNAGHSM 199
            |.:......|. |.|.|..|.:..|||:.|..|     ||..   ..|..:|.|||         
  Fly   119 QESIKRSNSED-TMAWDNIQQKLMCCGVDSPAD-----WRTL---SANKTLPGSCC--------- 165

  Fly   200 AYLDPKPANESMCQSLERLSYERERHTE-SCLPHLDNWYREQYSIFLGASLILAMIEFCVLLAII 263
               .|:..:.::...||..:..::::.: .|:..|.:...:...|.:|..:.:|.|:   :|.|:
  Fly   166 ---QPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQ---ILGIV 224

  Fly   264 MSC---TGLASQRAR 275
            ::|   ..:..:||:
  Fly   225 LACYLANSIRQERAK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 35/155 (23%)
tetraspanin_LEL 117..241 CDD:239401 27/124 (22%)
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 58/265 (22%)
tetraspanin_LEL <134..205 CDD:351888 19/90 (21%)

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