DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:222 Identity:46/222 - (20%)
Similarity:84/222 - (37%) Gaps:57/222 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KFVLNLCNFLFLICGLLLVVSGLYI---FSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGVAI 69
            ::||.:.:.:..:.|.||:..|.::   .|:.:|:|       ..|....|       .|:...:
  Fly     9 RYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRML-------GMDHGEDL-------AAVLCVL 59

  Fly    70 AGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAIT------LWPHCLGISLDET 128
            .|.|..:|::.|..|....:...|..|.:.:|.||:.:.|| ::|:      ..|..|...||:.
  Fly    60 LGTVIVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVL-VSISYAASRDFLPDSLRQGLDDL 123

  Fly   129 QMVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWPVPLSCCFLK 193
            ..:           |.:..:.|:..:....|||..|:.|| ..|.::.         |.|||..:
  Fly   124 WDL-----------QHEGNSTLNTYEEWLHCCGRNSAEDY-LHLEKMP---------PPSCCLNR 167

  Fly   194 NAGHSM------------AYLDPKPAN 208
            :....:            .|:..|.||
  Fly   168 DCTKHLNLFMTGCEVKFKEYVGAKTAN 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 46/222 (21%)
tetraspanin_LEL 117..241 CDD:239401 21/104 (20%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 46/222 (21%)
tetraspanin_LEL 109..192 CDD:239401 18/103 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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