DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tsp42Ee

DIOPT Version :9

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:202 Identity:46/202 - (22%)
Similarity:77/202 - (38%) Gaps:64/202 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGVAIAGF 72
            |::|.:.|.:..:.|:|.:|.|:.|.   |.|.:..:.......:.:| .|::. |:|| :|..|
  Fly     9 KYILFIFNTIVSVIGILGIVYGVLIL---KSIGVVEVNGQVGFPIQAL-MPIIL-ISLG-SIVVF 67

  Fly    73 VATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQMVRSLQSN 137
            ::.|    |...:...:.|....|...:::||:.:  |...:.|:.|                  
  Fly    68 ISFL----GCCGAIRESVCMTMSYATFLLILLILQ--LTFVVLLFTH------------------ 108

  Fly   138 YGVPGQEQFTNAL-------------------DLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNW 183
                 :|:|.||:                   |..|....|||..|:|||       .|.|..  
  Fly   109 -----REEFENAMGNVIENAWNSEHTYKGGVFDTIQKSLHCCGSSSALDY-------IGKGDL-- 159

  Fly   184 PVPLSCC 190
             ||.|||
  Fly   160 -VPPSCC 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 46/202 (23%)
tetraspanin_LEL 117..241 CDD:239401 21/93 (23%)
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 46/202 (23%)
tetraspanin_LEL 106..187 CDD:239401 21/93 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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