DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tsp33B

DIOPT Version :9

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster


Alignment Length:275 Identity:51/275 - (18%)
Similarity:89/275 - (32%) Gaps:67/275 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGVAIAG--FVATLAAVVGF 82
            :.|||::|...|..:            ..:..||.:...|::....|:.:.|  .|.|....:..
  Fly    21 VIGLLILVVTAYYHT------------VLTGYLSDIECRLVYGYLFGIYVFGAQVVVTFLCSIAM 73

  Fly    83 WASCLHTYCFLTIYFLSVVVLLLTESVLCLAIT-----LWPHCLGISLDE----TQMVRSLQSNY 138
            |.......|...|..|..|....:    |:.|.     :|....|:.:.|    |.:.|.:...|
  Fly    74 WRRIWRRRCTPNIRLLLSVWAFYS----CVIIASGFGCVWNLYRGVDVLENAADTSLTRGIDMYY 134

  Fly   139 GVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLW--RLQGYGQRNWPVPLSCC----------F 191
            ..|..:...:.|   |....|||:....|:..:.|  |.:.........|.:||          |
  Fly   135 SCPEWKLLWDGL---QWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSCFNNF 196

  Fly   192 LKNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYSIFLGA-----SLIL 251
            |.:.|.|:.....:|.......|:         :...|||           .|:.|     .:::
  Fly   197 LPSEGQSIGGNSRQPFPALTVDSI---------NANGCLP-----------AFVSAVWNCFYILM 241

  Fly   252 AMIEFCVLLAIIMSC 266
            |:....:...|::.|
  Fly   242 ALWVLALKFLIVLCC 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 51/275 (19%)
tetraspanin_LEL 117..241 CDD:239401 27/139 (19%)
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 50/273 (18%)
CD151_like_LEL 112..237 CDD:239408 28/147 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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