DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and Tsp2A

DIOPT Version :9

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster


Alignment Length:189 Identity:41/189 - (21%)
Similarity:54/189 - (28%) Gaps:96/189 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CFNYKFVLNLCNFLFL---ICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIAL 65
            |.:......|..|:|:   :.|.:.:|:|            |.:|...|...||| |||     |
  Fly    84 CLSALMENTLALFVFVGTQVFGFIAIVAG------------SAVLLQFSTINSSL-QPL-----L 130

  Fly    66 GVAIAGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQM 130
            .|::.|||||..          :||                                        
  Fly   131 NVSLRGFVATSE----------YTY---------------------------------------- 145

  Fly   131 VRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWPVPLSC 189
                 |||          .|.:.|...||||.       |..|   .|.....|:|.||
  Fly   146 -----SNY----------VLTMIQENIGCCGA-------TGPW---DYLDLRQPLPSSC 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 40/185 (22%)
tetraspanin_LEL 117..241 CDD:239401 16/73 (22%)
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 41/189 (22%)
tetraspanin_LEL 116..204 CDD:239401 33/145 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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