Protein Alignment Tsp68C and Tspan1

DIOPT Version :10

• Sequence 1: NP_729926.1
• Gene: Tsp68C / 117407
• FlyBaseID: FBgn0043550
• Length: 362
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 273
• Identity: 53/273 - (19%)
• Similarity: 110/273 - (40%)
• Gaps: 52/273 - (19%)

  Fly     4 CFNY-KFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALG- 66
            ||.: |.::.|.|.|..:||..|:..|:::..|....|.:         ..||....:.::.:|
  Rat     3 CFKFIKVMMILFNLLIFLCGAALLAVGIWVSVDGTSFLKA---------FGSLSSSAMQFVNVGY 58

  Fly    67 -VAIAGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTE---SVLCLAITLWPHCLGISLDE 127
             :..||.|..:...:|.:.:.....|.|.::|..::::.:.|   :|:.|..|.........|
  Rat    59 FLIAAGAVLFILGFLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALVYTTMAEQFLTFL-- 121

  Fly   128 TQMVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWPVPLSCCFL 192
              :|.:::.:||.  |.:||...:.......|||..:..|:::|     .:.:.|...|..||..
  Rat   122 --VVPAIEKDYGY--QTEFTQVWNSTMEGLHCCGFNNYTDFNSS-----RFVKENKVFPPFCCAN 177

  Fly   193 KNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYSIFLG----------- 246
            ....|::     :|..|...:|:         :.:.|...:....|.. ::.:|
  Rat   178 NTDSHTV-----EPCTEDKAKSM---------NVQGCFKQILQKIRTN-AVTVGGVAVGVAALEL 227

  Fly   247 ASLILAMIEFCVL 259
            |:::::|..:|.|
  Rat   228 AAMVVSMYLYCNL 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp68C	NP_729926.1	Tetraspanin	8..>161	CDD:459767	32/157 (20%)
		tetraspanin_LEL	117..241	CDD:239401	22/123 (18%)
Tspan1	NP_001004236.1	Tetraspanin	7..>151	CDD:459767	32/158 (20%)
		uroplakin_I_like_LEL	106..211	CDD:239409	24/129 (19%)