DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp68C and tsp-8

DIOPT Version :10

Sequence 1:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:311 Identity:67/311 - (21%)
Similarity:119/311 - (38%) Gaps:83/311 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MACCFN-YKFVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSD--RLSSLPQPLLFY 62
            |..|.| .:.|..|.||.|.:.|:::...|:::..|          .|:||  .|.|.......|
 Worm     1 MGSCVNALRIVTFLFNFAFWLSGVVVFGLGIWLLFD----------PAASDFFALHSTHPGAFRY 55

  Fly    63 IALGVAIAGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLW------PHCL 121
            :...:..||.:..|....|...:.....|.|..:...:::....|  |..|:||:      .|.:
 Worm    56 VGWFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLE--LAAAVTLFHKQEHIKHYV 118

  Fly   122 GISLDETQMVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLW------------- 173
                 |:.|..::::.|.  .:..|.:|.|..|.:|.|||:::..|:.::.|             
 Worm   119 -----ESSMYDTIRNRYS--SETAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEE 176

  Fly   174 ---RLQ------------GYGQRNWPVPLSCC-------FLKNAGHSMAYLDPKPANESMCQSLE 216
               |::            |||:    ||.|||       :..|.|.|.:   ..|.|        
 Worm   177 DAGRIEHGIGAFGGNKGTGYGR----VPSSCCNEHGKLSYPNNCGRSFS---QAPLN-------- 226

  Fly   217 RLSYERERHTESCLPHLDNWYREQYSIFLGASLILAMIEFCVLLAIIMSCT 267
              :|.:..:|..|...:........|:.:|..::|.:::   ||.|::|.|
 Worm   227 --TYAQFINTRGCADAVYESVSSSLSLIVGVCVVLCIVQ---LLGIVLSMT 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 35/160 (22%)
tetraspanin_LEL 117..241 CDD:239401 31/164 (19%)
tsp-8NP_510445.1 Tetraspanin 8..>151 CDD:459767 35/161 (22%)
tetraspanin_LEL 108..243 CDD:239401 31/158 (20%)

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