DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and TUB4

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_199247.1 Gene:TUB4 / 834459 AraportID:AT5G44340 Length:444 Species:Arabidopsis thaliana


Alignment Length:456 Identity:219/456 - (48%)
Similarity:316/456 - (69%) Gaps:20/456 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTI 65
            ||||:.:|.|..||.||..||.||..|||:|: :|::.|.||||||||:|:||..:..::..|.:
plant     1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDH-TGQYVGDSPLQLERIDVYFNEASGGKYVPRAV 64

  Fly    66 LIDTEASTIQRLNAS--SQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDS 128
            |:|.|..|:..|.:.  .|::||:|||.|...||||:|:|::|:||.::|.||:..|:|.|:.|.
plant    65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDC 129

  Fly   129 LQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVN 193
            |||||:.||:|||||||:.:|::..:.|:|||.::..:...|||.:|..|||||||.||...||.
plant   130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194

  Fly   194 NSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVP 258
            |:.....||||||:.||.|.|||....:..:||:::.||||:|.|||||||||:.|||:.||::|
plant   195 NADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIP 259

  Fly   259 FPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPR 323
            ||||||.:.|||||.:...||:|..:|.||.||::.:.|::||.|.|.|:.|||:.:|||::|.:
plant   260 FPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTK 324

  Fly   324 EVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSML 388
            |||:.|..::|||.:.||:|||||:|:::|||.|:||||::|||||:|:||.:|:|:.:...:|.
plant   325 EVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMF 389

  Fly   389 RRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEGEDSGGGGGGGGGRSGSAESGEEEATP 453
            ||||.|||||||||:|.||.:|:..:..::.:|:...:                 |.:||||...
plant   390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQD-----------------ATAGEEEYEE 437

  Fly   454 E 454
            |
plant   438 E 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 212/424 (50%)
TUB4NP_199247.1 PLN00220 1..431 CDD:215107 214/447 (48%)

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