DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and Tube1

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_082282.1 Gene:Tube1 / 71924 MGIID:1919174 Length:475 Species:Mus musculus


Alignment Length:466 Identity:132/466 - (28%)
Similarity:215/466 - (46%) Gaps:57/466 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFF----------NAT 55
            |.:.|.:|:|..||.||..||.:...||......|.:.       :.|:.||          ..:
Mouse     1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYD-------DAISSFFRNVDTRAVGDGGS 58

  Fly    56 ASK----RFYARTILIDTEASTIQRL--NASSQLYRPENFVAGSESAGNNFARGYHTDGAAILDQ 114
            .||    ...||.:|||.|...:..:  .....::..:..:.....:|||:|.|:...|....:|
Mouse    59 ISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQ 123

  Fly   115 VLENTRREVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNM-SQVV 178
            :||..|:..|..|.||.|.::||:||||||||.:.:::.|.:::|:  :..:||...|:. ..|:
Mouse   124 ILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPE--VYRFVTAVYPSSEDDVI 186

  Fly   179 VEPYNALLSTPALVNNSHLTFCLDNEALFQICNRNLKLKMSG----------------------- 220
            ..|||::|:...|..::.....:||::||.|.::...:..||                       
Mouse   187 TSPYNSMLAMKELNEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNMGAVKKHH 251

  Fly   221 ---YEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSK 282
               ::.:|:|||..:..:|:..||.|.||..|.:|.:|:||||:||:|:....||.|........
Mouse   252 KKPFDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIPP 316

  Fly   283 GTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPREVDQLMTGV-RNKNINNFVDWIPN 346
            ..:.::....|..::.|...|.|....|..|.|.||.:   ::..|...: |.|....||.|...
Mouse   317 RRLDQMFSDAFSKDHQLIQADPRHSLYLACALIVRGNV---QISDLRRNIERLKPALQFVSWNQE 378

  Fly   347 NIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTG-EGMEEQEFQDA 410
            ..||::|.:||.|...|...:.|.|.::..|..|.:....:.::|||||.|.. :||||..|.:|
Mouse   379 GWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEA 443

  Fly   411 QQELQAIIDDY 421
            ...|.|:|.:|
Mouse   444 VSSLSALIQEY 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 131/465 (28%)
Tube1NP_082282.1 epsilon_tubulin 2..457 CDD:276959 131/465 (28%)

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