DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and tubb1

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001313351.1 Gene:tubb1 / 558552 ZFINID:ZDB-GENE-110408-5 Length:466 Species:Danio rerio


Alignment Length:424 Identity:230/424 - (54%)
Similarity:306/424 - (72%) Gaps:3/424 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTI 65
            |||||.||||..||.||..||.|||.|||::.. |.:.|...|||||:||:||.....::..|.:
Zfish     1 MREIVHLQIGQCGNQIGSKFWEVISDEHGINRV-GAYEGDMDLQLERVNVYFNEAHGGKYVPRAL 64

  Fly    66 LIDTEASTIQRLNAS--SQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDS 128
            |:|.|..|:..:..|  .||:||:||:.|:..||||:|:|::|:||.:::||::..|.|.||.|.
Zfish    65 LVDLEPGTMDSVRGSQIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRVRNEAESCDC 129

  Fly   129 LQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVN 193
            :||||.:||:|||||||:.:||:..:.|:|||.::.::..:|||.:|..|||||||.||...|:.
Zfish   130 MQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVVEPYNATLSIHQLIE 194

  Fly   194 NSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVP 258
            |:..|:|:|||||:.||.|.|||....|..:||:|:|||||:||.|||||||||.|||:.|||||
Zfish   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSLRFPGQLNADLRKLAVNMVP 259

  Fly   259 FPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPR 323
            ||||||.:||||||.....||:...||.||.||:|...|::.|.|.|:|:.||.|||||||||.:
Zfish   260 FPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDPRNMMTACDPRRGRYLTVAGIFRGRMSTK 324

  Fly   324 EVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSML 388
            |||:.|..::.||.|.||||||:|:|.|:||||||||||::|||||.||||.:|:|:.:....|.
Zfish   325 EVDEQMLAIQQKNSNYFVDWIPHNVKVAVCDIPPRGLKMASTFIGNNTAIQEVFKRIGEQFALMF 389

  Fly   389 RRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR 422
            ||||.|||||||||:|.||.:|:..|..::.:|:
Zfish   390 RRKAFLHWYTGEGMDELEFSEAESNLNDLVSEYQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 229/423 (54%)
tubb1NP_001313351.1 PTZ00010 1..433 CDD:240228 230/424 (54%)

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