DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and Tuba8

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_017448333.3 Gene:Tuba8 / 500377 RGDID:1566041 Length:600 Species:Rattus norvegicus


Alignment Length:450 Identity:158/450 - (35%)
Similarity:248/450 - (55%) Gaps:25/450 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERIN------VFFNATASKRF 60
            ||.:::.:|.||..||::.|.:...|||:. |.|.||    .|..:||      .||:.|.:.:.
  Rat   153 RECISVHVGQAGVQIGNACWELFCLEHGIQ-ADGTFG----TQASKINDDDSFTTFFSETGNGKH 212

  Fly    61 YARTILIDTEASTIQRLNASS--QLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREV 123
            ..|.:::|.|.:.:..:.|.:  ||:.||..:.|.|.|.||:|||::|.|...:|.||:..|:..
  Rat   213 VPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLT 277

  Fly   124 ESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLST 188
            ::...||||.:.||.|||||||.|||:||.|...|.......:...|:|.:|..||||||::|:|
  Rat   278 DACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 342

  Fly   189 PALVNNSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIY 253
            ...:.:|...|.:||||::.||.|||.::...|.::|.:::..:|.||..|||.|.||..|.:..
  Rat   343 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 407

  Fly   254 VNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRG 318
            .|:||:||:||.:..:||:|:.::....:.:|:|:....|..|:.:...|.|.||.:....::||
  Rat   408 TNLVPYPRIHFPLVTYAPIVSAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRG 472

  Fly   319 RMSPREVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPP--------RGLKMSATFIGNTTAIQT 375
            .:.|::|:..:..::.|....||||.|...|..|...||        ..::.:...:.|||||..
  Rat   473 DVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 537

  Fly   376 LFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR----SSAEGEDSG 431
            .:.||......|..::|.:|||.||||||.||.:|:::|.|:..||.    .|.|.|:.|
  Rat   538 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEG 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 154/442 (35%)
Tuba8XP_017448333.3 None

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