DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and tubb4b

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_942104.2 Gene:tubb4b / 336681 ZFINID:ZDB-GENE-030131-8625 Length:445 Species:Danio rerio


Alignment Length:454 Identity:241/454 - (53%)
Similarity:318/454 - (70%) Gaps:15/454 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTI 65
            |||||.||.|..||.||..||.|||.|||:| .:|.:.|.|.|||:||||::|.....::..|.:
Zfish     1 MREIVHLQAGQCGNQIGAKFWEVISDEHGID-PTGSYHGDSDLQLDRINVYYNEATGGKYVPRAV 64

  Fly    66 LIDTEASTIQRLNAS--SQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDS 128
            |:|.|..|:..:.:.  .|::||:|||.|...||||:|:|::|:||.::|.||:..|:|.||.|.
Zfish    65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 129

  Fly   129 LQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVN 193
            ||||||.||:|||||||:.:|::..:.|:|||.::..:..:|||.:|..|||||||.||...||.
Zfish   130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE 194

  Fly   194 NSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVP 258
            |:..|:|:|||||:.||.|.|||....|..:||:|:.||||:||||||||||||.|||:.|||||
Zfish   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259

  Fly   259 FPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPR 323
            ||||||.:||||||.:...||:...||.||.||:|.:.|::.|.|.|.|:.||.|.:||||||.:
Zfish   260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK 324

  Fly   324 EVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSML 388
            |||:.|..|:|||.:.||:|||||:|||:||||||||||:||||||:||||.||:|:.:...:|.
Zfish   325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMF 389

  Fly   389 RRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR--SSAEGEDSGGGGGGGGGRSGSAESGEEE 450
            ||||.|||||||||:|.||.:|:..:..::.:|:  ..|..|:.|          ...|.||||
Zfish   390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEG----------EFEEEGEEE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 232/426 (54%)
tubb4bNP_942104.2 PLN00220 1..430 CDD:215107 234/429 (55%)

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